RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 ZNF251Q9BRH9 671 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 MRPL20Q9BYC9 149 aaKnown RBP4.85□□□□□ -1.63
SDCBP-210ENST00000522843 NMES1Q9C002 83 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 SLC5A7Q9GZV3 580 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 TMEM222Q9H0R3 208 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 SLA2Q9H6Q3 261 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 OR2S2Q9NQN1 319 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 CCL28Q9NRJ3 127 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 VPS13BQ7Z7G8 4022 aa4.85□□□□□ -1.63
SDCBP-210ENST00000522843 C3orf85A0A1B0GTC6 90 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 PRYO14603 147 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 RBFOX2O43251 390 aaKnown RBP eCLIP4.84□□□□□ -1.63
SDCBP-210ENST00000522843 SLC25A4P12235 298 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 S100GP29377 79 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 FGL1Q08830 312 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 GUCA2BQ16661 112 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 ANKRD55Q3KP44 614 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 ZNF343Q6P1L6 599 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 NOXA1Q86UR1 476 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 LGI3Q8N145 548 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 C2CD4CQ8TF44 421 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 TMEM170AQ8WVE7 144 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 IL1F10Q8WWZ1 152 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 LSM10Q969L4 123 aaKnown RBP4.84□□□□□ -1.63
SDCBP-210ENST00000522843 SCRT2Q9NQ03 307 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 OR1A1Q9P1Q5 309 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 PEMTQ9UBM1 199 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 PEF1Q9UBV8 284 aaKnown RBP4.84□□□□□ -1.63
SDCBP-210ENST00000522843 FBXL17Q9UF56 701 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 TMED3Q9Y3Q3 217 aa4.84□□□□□ -1.63
SDCBP-210ENST00000522843 C13orf42A0A1B0GVH6 325 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 USP17L23D6RBM5 183 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 M0R2N4 97 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 BMPR1BO00238 502 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 PSG1P11464 419 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 TCTAP57738 103 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 BRWD1-AS2P59051 145 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 FXYD4P59646 89 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 RPEL1Q2QD12 228 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 ZNF585BQ52M93 769 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 SERTAD4-AS1Q5TG53 156 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 FAM71F2Q6NXP2 309 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 GSG1LQ6UXU4 331 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 TBC1D26Q86UD7 250 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 SELENOHQ8IZQ5 122 aaKnown RBP4.83□□□□□ -1.64
SDCBP-210ENST00000522843 TMEM61Q8N0U2 210 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 DRAXINQ8NBI3 349 aaPredicted RBP4.83□□□□□ -1.64
SDCBP-210ENST00000522843 UXS1Q8NBZ7 420 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 OR5T1Q8NG75 326 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 CD300LFQ8TDQ1 290 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 SECTM1Q8WVN6 248 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 ABHD14BQ96IU4 210 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 C2orf50Q96LR7 162 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 CLCC1Q96S66 551 aa4.83□□□□□ -1.64
SDCBP-210ENST00000522843 HSD17B10Q99714 261 aaKnown RBP4.83□□□□□ -1.64
SDCBP-210ENST00000522843 FLG2Q5D862 2391 aaPredicted RBP4.83□□□□□ -1.64
SDCBP-210ENST00000522843 C2orf70A6NJV1 201 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 IGLL5B9A064 214 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 RAB29O14966 203 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 PITX3O75364 302 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 CA2P00918 260 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 IFNA21P01568 189 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 OR5AC1P0C628 307 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 P0C879 139 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 FOLR2P14207 255 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 PSMB6P28072 239 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 FCGR2BP31994 310 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-210ENST00000522843 DUTP33316 252 aaKnown RBP4.82□□□□□ -1.64
SDCBP-210ENST00000522843 PPP1CCP36873 323 aaKnown RBP4.82□□□□□ -1.64
SDCBP-210ENST00000522843 EIF2B2P49770 351 aaKnown RBP4.82□□□□□ -1.64
SDCBP-210ENST00000522843 TMEM267Q0VDI3 215 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-210ENST00000522843 GNMTQ14749 295 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 ZFP69Q49AA0 526 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 AARDQ4LEZ3 155 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 PHLDA2Q53GA4 152 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 Q5BKY6 102 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 NMSQ5H8A3 153 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 LAMTOR1Q6IAA8 161 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 ZNF562Q6V9R5 426 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 ZNF833PQ6ZTB9 187 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 FAM219AQ8IW50 185 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 TMEM217Q8N7C4 229 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 ZBTB8BQ8NAP8 495 aaPredicted RBP4.82□□□□□ -1.64
SDCBP-210ENST00000522843 TMEM116Q8NCL8 245 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 OR11H4Q8NGC9 324 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 OR2T35Q8NGX2 323 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 LHFPL5Q8TAF8 219 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 C11orf45Q8TAV5 145 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 CACNG8Q8WXS5 425 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 RBPMSQ93062 196 aaKnown RBP4.82□□□□□ -1.64
SDCBP-210ENST00000522843 C5orf30Q96GV9 206 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 ADTRPQ96IZ2 230 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 OR10C1Q96KK4 312 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 TP53RKQ96S44 253 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 RNF126Q9BV68 326 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 IFI27L2Q9H2X8 130 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 SDHAF2Q9NX18 166 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 COA4Q9NYJ1 87 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 GNG12Q9UBI6 72 aa4.82□□□□□ -1.64
SDCBP-210ENST00000522843 CACFD1Q9UGQ2 172 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms