RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 IGKV3-7A0A075B6H7 116 aa13.33□□□□□ -0.28
CLK4-211ENST00000522556 H3BP45 60 aa13.33□□□□□ -0.28
CLK4-211ENST00000522556 WRBO00258 174 aa13.33□□□□□ -0.28
CLK4-211ENST00000522556 CCSO14618 274 aa13.33□□□□□ -0.28
CLK4-211ENST00000522556 NHLRC4P0CG21 123 aaPredicted RBP13.33□□□□□ -0.28
CLK4-211ENST00000522556 HAGHQ16775 308 aa13.33□□□□□ -0.28
CLK4-211ENST00000522556 LINC00322Q6ZN03 302 aaPredicted RBP13.33□□□□□ -0.28
CLK4-211ENST00000522556 COQ8AQ8NI60 647 aa13.33□□□□□ -0.28
CLK4-211ENST00000522556 TUBA4BQ9H853 241 aa13.33□□□□□ -0.28
CLK4-211ENST00000522556 RETNQ9HD89 108 aa13.33□□□□□ -0.28
CLK4-211ENST00000522556 U3KQ87 197 aa13.33□□□□□ -0.28
CLK4-211ENST00000522556 TRAV14DV4A0A0A6YYC5 116 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 TRAV25A0A0B4J276 109 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 FAM90A26D6RGX4 464 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 TSPAN4O14817 238 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 SYNGR2O43760 224 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 IFNA4P05014 189 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 SLC25A4P12235 298 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 OR10J1P30954 320 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 POLR2GP62487 172 aaKnown RBP eCLIP13.32□□□□□ -0.28
CLK4-211ENST00000522556 FAM90A2PQ658T7 463 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 OR4D5Q8NGN0 318 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 MITD1Q8WV92 249 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 TM2D3Q9BRN9 247 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 CACFD1Q9UGQ2 172 aa13.32□□□□□ -0.28
CLK4-211ENST00000522556 PAIP2BQ9ULR5 123 aaKnown RBP13.32□□□□□ -0.28
CLK4-211ENST00000522556 UPK1BO75841 260 aa13.31□□□□□ -0.28
CLK4-211ENST00000522556 ASAH1Q13510 395 aa13.31□□□□□ -0.28
CLK4-211ENST00000522556 ODF3L2Q3SX64 289 aa13.31□□□□□ -0.28
CLK4-211ENST00000522556 RCHY1Q96PM5 261 aa13.31□□□□□ -0.28
CLK4-211ENST00000522556 SPAG8Q99932 426 aaPredicted RBP13.31□□□□□ -0.28
CLK4-211ENST00000522556 VSIRQ9H7M9 311 aa13.31□□□□□ -0.28
CLK4-211ENST00000522556 IGKV1D-37A0A075B6S9 117 aa13.3□□□□□ -0.28
CLK4-211ENST00000522556 PIGBOS1A0A0B4J2F0 54 aa13.3□□□□□ -0.28
CLK4-211ENST00000522556 PRSS46E5RG02 174 aa13.3□□□□□ -0.28
CLK4-211ENST00000522556 TFPI2P48307 235 aa13.3□□□□□ -0.28
CLK4-211ENST00000522556 GAMTQ14353 236 aa13.3□□□□□ -0.28
CLK4-211ENST00000522556 ZNF846Q147U1 533 aa13.3□□□□□ -0.28
CLK4-211ENST00000522556 ZNF124Q15973 351 aa13.3□□□□□ -0.28
CLK4-211ENST00000522556 GBGT1Q8N5D6 347 aa13.3□□□□□ -0.28
CLK4-211ENST00000522556 OR1S2Q8NGQ3 325 aa13.3□□□□□ -0.28
CLK4-211ENST00000522556 GINS3Q9BRX5 216 aa13.3□□□□□ -0.28
CLK4-211ENST00000522556 WDR12Q9GZL7 423 aaKnown RBP13.3□□□□□ -0.28
CLK4-211ENST00000522556 SSSCA1O60232 199 aa13.29□□□□□ -0.28
CLK4-211ENST00000522556 CCNKO75909 580 aa13.29□□□□□ -0.28
CLK4-211ENST00000522556 ID3Q02535 119 aa13.29□□□□□ -0.28
CLK4-211ENST00000522556 USF2Q15853 346 aaPredicted RBP13.29□□□□□ -0.28
CLK4-211ENST00000522556 SPANXN5Q5MJ07 72 aa13.29□□□□□ -0.28
CLK4-211ENST00000522556 TCF24Q7RTU0 167 aa13.29□□□□□ -0.28
CLK4-211ENST00000522556 IGKV1OR2-108A0A075B7D4 117 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 TRAV30A0A087WSZ9 112 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 FAM240BA0A1B0GVZ2 78 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 MED6O75586 246 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 DFFBO76075 338 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 SCGB1D2O95969 90 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 H2AFB2P0C5Z0 115 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 NKX2-1P43699 371 aaPredicted RBP13.28□□□□□ -0.28
CLK4-211ENST00000522556 ZNF90Q03938 601 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 IAH1Q2TAA2 248 aaPredicted RBP13.28□□□□□ -0.28
CLK4-211ENST00000522556 ETFRF1Q6IPR1 90 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 NOXA1Q86UR1 476 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 FAM24BQ8N5W8 94 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 ZBTB8BQ8NAP8 495 aaPredicted RBP13.28□□□□□ -0.28
CLK4-211ENST00000522556 FAM110AQ9BQ89 295 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 BATF3Q9NR55 127 aa13.28□□□□□ -0.28
CLK4-211ENST00000522556 RCL1Q9Y2P8 373 aaKnown RBP13.28□□□□□ -0.28
CLK4-211ENST00000522556 TOMM40O96008 361 aa13.27□□□□□ -0.29
CLK4-211ENST00000522556 IFNA21P01568 189 aa13.27□□□□□ -0.29
CLK4-211ENST00000522556 IL4P05112 153 aa13.27□□□□□ -0.29
CLK4-211ENST00000522556 PSG1P11464 419 aa13.27□□□□□ -0.29
CLK4-211ENST00000522556 CRYBB3P26998 211 aa13.27□□□□□ -0.29
CLK4-211ENST00000522556 PAX9P55771 341 aa13.27□□□□□ -0.29
CLK4-211ENST00000522556 YPEL3P61236 119 aaPredicted RBP13.27□□□□□ -0.29
CLK4-211ENST00000522556 LAMTOR1Q6IAA8 161 aa13.27□□□□□ -0.29
CLK4-211ENST00000522556 ZNF431Q8TF32 576 aaPredicted RBP13.27□□□□□ -0.29
CLK4-211ENST00000522556 STAB2Q8WWQ8 2551 aa13.27□□□□□ -0.29
CLK4-211ENST00000522556 NPPCP23582 126 aa13.26□□□□□ -0.29
CLK4-211ENST00000522556 WFDC3Q8IUB2 231 aa13.26□□□□□ -0.29
CLK4-211ENST00000522556 APRG1Q8IVJ8 170 aa13.26□□□□□ -0.29
CLK4-211ENST00000522556 SLC35E1Q96K37 410 aa13.26□□□□□ -0.29
CLK4-211ENST00000522556 WWC2-AS2Q96NR7 200 aa13.26□□□□□ -0.29
CLK4-211ENST00000522556 CIB3Q96Q77 187 aaPredicted RBP13.26□□□□□ -0.29
CLK4-211ENST00000522556 METTL26Q96S19 204 aa13.26□□□□□ -0.29
CLK4-211ENST00000522556 GSKIPQ9P0R6 139 aa13.26□□□□□ -0.29
CLK4-211ENST00000522556 U3KQE9 123 aa13.26□□□□□ -0.29
CLK4-211ENST00000522556 PMS2P5A8MQ11 134 aa13.25□□□□□ -0.29
CLK4-211ENST00000522556 GPX4P36969 197 aaPredicted RBP13.25□□□□□ -0.29
CLK4-211ENST00000522556 P2RY1P47900 373 aa13.25□□□□□ -0.29
CLK4-211ENST00000522556 RAB11AP62491 216 aa13.25□□□□□ -0.29
CLK4-211ENST00000522556 OR2F1Q13607 317 aa13.25□□□□□ -0.29
CLK4-211ENST00000522556 MZT2BQ6NZ67 158 aa13.25□□□□□ -0.29
CLK4-211ENST00000522556 GSG1LQ6UXU4 331 aa13.25□□□□□ -0.29
CLK4-211ENST00000522556 ACOT7LQ6ZUV0 252 aa13.25□□□□□ -0.29
CLK4-211ENST00000522556 NRARPQ7Z6K4 114 aa13.25□□□□□ -0.29
CLK4-211ENST00000522556 OR51G1Q8NGK1 321 aa13.25□□□□□ -0.29
CLK4-211ENST00000522556 Q8WTZ3 238 aa13.25□□□□□ -0.29
CLK4-211ENST00000522556 OR4C46A6NHA9 309 aa13.24□□□□□ -0.29
CLK4-211ENST00000522556 ZFP92A6NM28 416 aa13.24□□□□□ -0.29
CLK4-211ENST00000522556 FAM25EA8MYX2 175 aa13.24□□□□□ -0.29
CLK4-211ENST00000522556 MBPP02686 304 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms