RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 IGKV1OR2-108A0A075B7D4 117 aa12.52□□□□□ -0.41
LSM1-204ENST00000522515 FNDC10F2Z333 226 aa12.52□□□□□ -0.41
LSM1-204ENST00000522515 PFDN1O60925 122 aa12.52□□□□□ -0.41
LSM1-204ENST00000522515 IGLC1P0CG04 106 aa12.52□□□□□ -0.41
LSM1-204ENST00000522515 ATP6V1FQ16864 119 aa12.52□□□□□ -0.41
LSM1-204ENST00000522515 FAM209BQ5JX69 171 aa12.52□□□□□ -0.41
LSM1-204ENST00000522515 TREML4Q6UXN2 200 aa12.52□□□□□ -0.41
LSM1-204ENST00000522515 OR1N2Q8NGR9 330 aa12.52□□□□□ -0.41
LSM1-204ENST00000522515 MFFQ9GZY8 342 aa12.52□□□□□ -0.41
LSM1-204ENST00000522515 NPVFQ9HCQ7 196 aa12.52□□□□□ -0.41
LSM1-204ENST00000522515 UQCC1Q9NVA1 299 aa12.52□□□□□ -0.41
LSM1-204ENST00000522515 GAR1Q9NY12 217 aaKnown RBP12.52□□□□□ -0.41
LSM1-204ENST00000522515 IGKV1D-37A0A075B6S9 117 aa12.51□□□□□ -0.41
LSM1-204ENST00000522515 VWC2Q2TAL6 325 aa12.51□□□□□ -0.41
LSM1-204ENST00000522515 TMEM144Q7Z5S9 345 aa12.51□□□□□ -0.41
LSM1-204ENST00000522515 TMEM147Q9BVK8 224 aa12.51□□□□□ -0.41
LSM1-204ENST00000522515 FBXL17Q9UF56 701 aa12.51□□□□□ -0.41
LSM1-204ENST00000522515 IGHV3-35A0A0C4DH35 117 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 LINC01619G3V211 115 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 CCL24O00175 119 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 NUPL2O15504 423 aaKnown RBP12.5□□□□□ -0.41
LSM1-204ENST00000522515 GGCTO75223 188 aaKnown RBP12.5□□□□□ -0.41
LSM1-204ENST00000522515 OR2C1O95371 312 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 IGKV1-17P01599 117 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 CXCL2P19875 107 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 OR10J1P30954 320 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 EIF2B2P49770 351 aaKnown RBP12.5□□□□□ -0.41
LSM1-204ENST00000522515 ZNF616Q08AN1 781 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 TIGITQ495A1 244 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 ZFP69Q49AA0 526 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 SPSB3Q6PJ21 355 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 THAP8Q8NA92 274 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 DPF1Q92782 380 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 ZNF414Q96IQ9 312 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 HYLS1Q96M11 299 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 WFDC1Q9HC57 220 aa12.5□□□□□ -0.41
LSM1-204ENST00000522515 TRAV30A0A087WSZ9 112 aa12.49□□□□□ -0.41
LSM1-204ENST00000522515 UBE2L5PA0A1B0GUS4 154 aa12.49□□□□□ -0.41
LSM1-204ENST00000522515 ZFP92A6NM28 416 aa12.49□□□□□ -0.41
LSM1-204ENST00000522515 FHL3Q13643 280 aa12.49□□□□□ -0.41
LSM1-204ENST00000522515 ATP5SQ99766 215 aa12.49□□□□□ -0.41
LSM1-204ENST00000522515 LSM4Q9Y4Z0 139 aaKnown RBP12.49□□□□□ -0.41
LSM1-204ENST00000522515 HOXD3P31249 432 aaPredicted RBP12.48□□□□□ -0.41
LSM1-204ENST00000522515 SLURP1P55000 103 aa12.48□□□□□ -0.41
LSM1-204ENST00000522515 ZNF90Q03938 601 aa12.48□□□□□ -0.41
LSM1-204ENST00000522515 OR2F1Q13607 317 aa12.48□□□□□ -0.41
LSM1-204ENST00000522515 ZNF345Q14585 488 aa12.48□□□□□ -0.41
LSM1-204ENST00000522515 RPEL1Q2QD12 228 aa12.48□□□□□ -0.41
LSM1-204ENST00000522515 TEPPQ6URK8 271 aa12.48□□□□□ -0.41
LSM1-204ENST00000522515 KCNRGQ8N5I3 272 aa12.48□□□□□ -0.41
LSM1-204ENST00000522515 WDR83OSQ9Y284 106 aa12.48□□□□□ -0.41
LSM1-204ENST00000522515 OR4F17Q8NGA8 305 aa12.47□□□□□ -0.41
LSM1-204ENST00000522515 OR4F4Q96R69 305 aa12.47□□□□□ -0.41
LSM1-204ENST00000522515 TRGV9Q99603 122 aa12.47□□□□□ -0.41
LSM1-204ENST00000522515 DFFBO76075 338 aa12.47□□□□□ -0.41
LSM1-204ENST00000522515 ZP3P21754 424 aa12.47□□□□□ -0.41
LSM1-204ENST00000522515 MYCNOSP40205 109 aa12.47□□□□□ -0.41
LSM1-204ENST00000522515 LGALSLQ3ZCW2 172 aaPredicted RBP12.47□□□□□ -0.41
LSM1-204ENST00000522515 BTNL8Q6UX41 500 aa12.47□□□□□ -0.41
LSM1-204ENST00000522515 A0A0D9SG52 128 aa12.46□□□□□ -0.42
LSM1-204ENST00000522515 SCGB2A1O75556 95 aa12.46□□□□□ -0.42
LSM1-204ENST00000522515 TSPAN15O95858 294 aa12.46□□□□□ -0.42
LSM1-204ENST00000522515 YPEL3P61236 119 aaPredicted RBP12.46□□□□□ -0.42
LSM1-204ENST00000522515 RELQ04864 619 aaPredicted RBP12.46□□□□□ -0.42
LSM1-204ENST00000522515 ZNF600Q6ZNG1 722 aa12.46□□□□□ -0.42
LSM1-204ENST00000522515 TMEM182Q6ZP80 229 aaPredicted RBP12.46□□□□□ -0.42
LSM1-204ENST00000522515 GPHB5Q86YW7 130 aa12.46□□□□□ -0.42
LSM1-204ENST00000522515 DLX4Q92988 240 aaPredicted RBP12.46□□□□□ -0.42
LSM1-204ENST00000522515 MGST2Q99735 147 aa12.46□□□□□ -0.42
LSM1-204ENST00000522515 WDR61Q9GZS3 305 aaKnown RBP12.46□□□□□ -0.42
LSM1-204ENST00000522515 AGPAT2O15120 278 aa12.45□□□□□ -0.42
LSM1-204ENST00000522515 PF4P02776 101 aa12.45□□□□□ -0.42
LSM1-204ENST00000522515 PSG1P11464 419 aa12.45□□□□□ -0.42
LSM1-204ENST00000522515 FGF7P21781 194 aa12.45□□□□□ -0.42
LSM1-204ENST00000522515 GATA2P23769 480 aaPredicted RBP12.45□□□□□ -0.42
LSM1-204ENST00000522515 NKX2-5P52952 324 aaPredicted RBP12.45□□□□□ -0.42
LSM1-204ENST00000522515 SYNJ2BPP57105 145 aa12.45□□□□□ -0.42
LSM1-204ENST00000522515 KLF5Q13887 457 aaPredicted RBP12.45□□□□□ -0.42
LSM1-204ENST00000522515 UNQ9165/PRO28630Q6UXU0 137 aa12.45□□□□□ -0.42
LSM1-204ENST00000522515 TMUB2Q71RG4 321 aa12.45□□□□□ -0.42
LSM1-204ENST00000522515 RCC1LQ96I51 464 aaKnown RBP12.45□□□□□ -0.42
LSM1-204ENST00000522515 ARL6Q9H0F7 186 aa12.45□□□□□ -0.42
LSM1-204ENST00000522515 PUS1Q9Y606 427 aaKnown RBP eCLIP12.45□□□□□ -0.42
LSM1-204ENST00000522515 IGHV3OR16-8A0A075B7F1 116 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 M0QZ24 198 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 NDUFA4O00483 81 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 YIF1AO95070 293 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 TOMM40O96008 361 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 IFNA5P01569 189 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 RD3LP0DJH9 198 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 CAMLGP49069 296 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 RPL7L1Q6DKI1 246 aaKnown RBP12.44□□□□□ -0.42
LSM1-204ENST00000522515 CYP2G1PQ6ZSU1 146 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 C9orf62Q8N4C0 152 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 Q8WTZ3 238 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 CYTL1Q9NRR1 136 aa12.44□□□□□ -0.42
LSM1-204ENST00000522515 ZNF320A2RRD8 509 aa12.43□□□□□ -0.42
LSM1-204ENST00000522515 TAAR5O14804 337 aa12.43□□□□□ -0.42
LSM1-204ENST00000522515 ZNF266Q14584 549 aa12.43□□□□□ -0.42
LSM1-204ENST00000522515 FAM106AQ4KMX7 169 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms