RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TPPP2P59282 170 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 RAB31Q13636 194 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 C15orf32Q32M92 178 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 EIF5AL1Q6IS14 154 aaKnown RBP10.17□□□□□ -0.78
CPNE3-205ENST00000522240 ACSM6Q6P461 480 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 TEX38Q6PEX7 206 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 HSD17B11Q8NBQ5 300 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 SCARB1Q8WTV0 552 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 EEF1AKMT3Q96AZ1 226 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 NPCDR1Q9BY65 106 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 GAR1Q9NY12 217 aaKnown RBP10.17□□□□□ -0.78
CPNE3-205ENST00000522240 C21orf62Q9NYP8 219 aa10.17□□□□□ -0.78
CPNE3-205ENST00000522240 TRBV7-1A0A0A6YYK4 115 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 A0A0G2JLM5 398 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 C17orf112F2Z3M2 114 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 CLN5O75503 358 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 SEC11BP0C7V7 166 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 SPP1P10451 314 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 MLANAQ16655 118 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 FAM209BQ5JX69 171 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 TEX261Q6UWH6 196 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 CENPVQ7Z7K6 275 aaPredicted RBP10.16□□□□□ -0.78
CPNE3-205ENST00000522240 OR4F5Q8NH21 305 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 ZNF502Q8TBZ5 544 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 MYOZ3Q8TDC0 251 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 NPIPB3Q92617 1050 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 MS4A10Q96PG2 267 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 TRGV9Q99603 122 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 MGST2Q99735 147 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 GGTLC1Q9BX51 225 aa10.16□□□□□ -0.78
CPNE3-205ENST00000522240 MRPL36Q9P0J6 103 aaKnown RBP10.16□□□□□ -0.78
CPNE3-205ENST00000522240 IGKV1OR2-108A0A075B7D4 117 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 TRAV30A0A087WSZ9 112 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 IGHV3-21A0A0B4J1V1 117 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 F8W735 103 aaPredicted RBP10.15□□□□□ -0.78
CPNE3-205ENST00000522240 CFDP00746 253 aaPredicted RBP10.15□□□□□ -0.78
CPNE3-205ENST00000522240 IGLC1P0CG04 106 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 CAMLGP49069 296 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 RAB9AP51151 201 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 RUNX1Q01196 453 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 DEFA5Q01523 94 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 ATP5G2Q06055 141 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 REC114Q7Z4M0 266 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 ZNF709Q8N972 641 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 OR2G3Q8NGZ4 309 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 LINC01006Q8NI28 216 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 WIPF2Q8TF74 440 aaPredicted RBP10.15□□□□□ -0.78
CPNE3-205ENST00000522240 RSG1Q9BU20 258 aa10.15□□□□□ -0.78
CPNE3-205ENST00000522240 IGKV1D-37A0A075B6S9 117 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 TCRBV4S1A1TA0A5B7 111 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 ZFP92A6NM28 416 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 AGPAT2O15120 278 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 GNG7O60262 68 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 IFNA7P01567 189 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 IGHV3-48P01763 117 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 FABP1P07148 127 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 OR10J1P30954 320 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 RPL29P47914 159 aaKnown RBP10.14□□□□□ -0.79
CPNE3-205ENST00000522240 SELENOTP62341 195 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 SERF2P84101 59 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 IFITM2Q01629 132 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 Q56UQ5 140 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 CYP2G1PQ6ZSU1 146 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 ZNF767PQ75MW2 155 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 ZNF329Q86UD4 541 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 KLHDC1Q8N7A1 406 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 OR4X2Q8NGF9 303 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 CCDC140Q96MF4 163 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 SH3BGRL3Q9H299 93 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 SLC25A32Q9H2D1 315 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 KLK15Q9H2R5 256 aa10.14□□□□□ -0.79
CPNE3-205ENST00000522240 A0A1B0GUS0 222 aa10.13□□□□□ -0.79
CPNE3-205ENST00000522240 C10orf99Q6UWK7 81 aa10.13□□□□□ -0.79
CPNE3-205ENST00000522240 ALKAL2Q6UX46 152 aa10.13□□□□□ -0.79
CPNE3-205ENST00000522240 ZNF680Q8NEM1 530 aa10.13□□□□□ -0.79
CPNE3-205ENST00000522240 TMED6Q8WW62 240 aa10.13□□□□□ -0.79
CPNE3-205ENST00000522240 TMEM158Q8WZ71 300 aa10.13□□□□□ -0.79
CPNE3-205ENST00000522240 UBQLN2Q9UHD9 624 aa10.13□□□□□ -0.79
CPNE3-205ENST00000522240 SLC45A2Q9UMX9 530 aa10.13□□□□□ -0.79
CPNE3-205ENST00000522240 TMA7Q9Y2S6 64 aaKnown RBP10.13□□□□□ -0.79
CPNE3-205ENST00000522240 CLPSL1A2RUU4 121 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 UMAD1C9J7I0 102 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 RGS13O14921 159 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 TSPAN15O95858 294 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 IGKV1-17P01599 117 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 GPR183P32249 361 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 RAB5CP51148 216 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 YPEL3P61236 119 aaPredicted RBP10.12□□□□□ -0.79
CPNE3-205ENST00000522240 KIAA0141Q14154 515 aaPredicted RBP10.12□□□□□ -0.79
CPNE3-205ENST00000522240 ZNF343Q6P1L6 599 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 SPSB3Q6PJ21 355 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 STPG3Q8N7X2 389 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 ZNF491Q8N8L2 437 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 WFDC12Q8WWY7 111 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 UBE2E2Q96LR5 201 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 PXMP4Q9Y6I8 212 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 S4R3C0 116 aa10.12□□□□□ -0.79
CPNE3-205ENST00000522240 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.11□□□□□ -0.79
CPNE3-205ENST00000522240 NUPL2O15504 423 aaKnown RBP10.11□□□□□ -0.79
CPNE3-205ENST00000522240 TGOLN2O43493 480 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms