RNA–Protein interactions for RNA: ENST00000522052.5

CTNNA1-233, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-233ENST00000522052 COL4A1P02462 1669 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 MYO7AQ13402 2215 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 CELSR1Q9NYQ6 3014 aa2.49□□□□□ -2.01
CTNNA1-233ENST00000522052 OBSCNQ5VST9 7968 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 CRYBG3Q68DQ2 2970 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 UTP20O75691 2785 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 SPTBN1Q01082 2364 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 SMIM9A6NGZ8 99 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 A8MUN3 132 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 PSMD12O00232 456 aaPredicted RBP2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 FADS1O60427 444 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 IGKV4-1P06312 121 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 CSRP1P21291 193 aaKnown RBP2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 OR4D2P58180 307 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 PSME3P61289 254 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 GLT6D1Q7Z4J2 308 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 ROPN1LQ96C74 230 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 MIEN1Q9BRT3 115 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 SHANK1Q9Y566 2161 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 ATMQ13315 3056 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 UBR4Q5T4S7 5183 aa2.48□□□□□ -2.01
CTNNA1-233ENST00000522052 CSPG4Q6UVK1 2322 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 SIP14410 1827 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 ICE1Q9Y2F5 2266 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 LCTP09848 1927 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 A0A0J9YX75 114 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 PQLC2LA1A4F0 135 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 TMEM235A6NFC5 223 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 BHLHE40O14503 412 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 PLA2G10O15496 165 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 LGALS3P17931 250 aaKnown RBP2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 HSD11B1P28845 292 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 XCL1P47992 114 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 TAS2R20P59543 309 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 DEFB103AP81534 67 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 MRPS25P82663 173 aaKnown RBP2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 OR5B17Q8NGF7 314 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 OR4C16Q8NGL9 310 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 OR13C8Q8NGS7 320 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 DCUN1D1Q96GG9 259 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 MMACHCQ9Y4U1 282 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 TLN2Q9Y4G6 2542 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 CENPEQ02224 2701 aa2.47□□□□□ -2.01
CTNNA1-233ENST00000522052 NBASA2RRP1 2371 aa2.46□□□□□ -2.01
CTNNA1-233ENST00000522052 MDFIC2A0A1B0GVS7 189 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 ZNF73O43830 326 aaPredicted RBP2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 NPYP01303 97 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 CD24P25063 80 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 GZMMP51124 257 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 POLR2GP62487 172 aaKnown RBP eCLIP2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 BASP1P80723 227 aaKnown RBP2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 EDDM3AQ14507 147 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 SPA17Q15506 151 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 BRD3OSQ6XYD6 125 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 C20orf196Q8IYI0 205 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 SMCR5Q8TEV8 140 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 C20orf166-AS1Q96NR2 134 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 PPP1R2P1Q96PQ5 205 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 TLNRD1Q9H1K6 362 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 CMTM6Q9NX76 183 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 PSORS1C2Q9UIG4 136 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 PKIGQ9Y2B9 76 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 FAM215AQ9Y5M1 114 aa2.46□□□□□ -2.02
CTNNA1-233ENST00000522052 NLRC5Q86WI3 1866 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 ARAP2Q8WZ64 1704 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 MGAQ8IWI9 3026 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 MED13LQ71F56 2210 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 BIRC6Q9NR09 4857 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 A0A087WUJ7 227 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 SPAARA0A1B0GVQ0 90 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 A0A1W2PQD3 144 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 SDHAF1A6NFY7 115 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 KNCNA6PVL3 124 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 ODF3BA8MYP8 253 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 KCNE1P15382 129 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 HIST1H1TP22492 207 aaPredicted RBP2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 FXYD7P58549 80 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 TNFRSF9Q07011 255 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 GLT8D1Q68CQ7 371 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 SMARCD3Q6STE5 483 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 DEFB124Q8NES8 71 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 KLK6Q92876 244 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 CCDC94Q9BW85 323 aaPredicted RBP2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 ZNF471Q9BX82 626 aaPredicted RBP2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 KRTAP4-3Q9BYR4 195 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 TUBA4BQ9H853 241 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 GLTPQ9NZD2 209 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 MRPL27Q9P0M9 148 aaKnown RBP2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 FBXO5Q9UKT4 447 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 COL6A5A8TX70 2615 aa2.45□□□□□ -2.02
CTNNA1-233ENST00000522052 RYR3Q15413 4870 aa2.44□□□□□ -2.02
CTNNA1-233ENST00000522052 ZNF638Q14966 1978 aaKnown RBP2.44□□□□□ -2.02
CTNNA1-233ENST00000522052 C11orf86A6NJI1 115 aa2.44□□□□□ -2.02
CTNNA1-233ENST00000522052 TXNDC9O14530 226 aa2.44□□□□□ -2.02
CTNNA1-233ENST00000522052 HAND1O96004 215 aa2.44□□□□□ -2.02
CTNNA1-233ENST00000522052 TTRP02766 147 aa2.44□□□□□ -2.02
CTNNA1-233ENST00000522052 ZNF728P0DKX0 622 aa2.44□□□□□ -2.02
CTNNA1-233ENST00000522052 BLVRBP30043 206 aaPredicted RBP2.44□□□□□ -2.02
CTNNA1-233ENST00000522052 CAPZBP47756 277 aa2.44□□□□□ -2.02
CTNNA1-233ENST00000522052 GABRA4P48169 554 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms