RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 ELANEP08246 267 aa16.61■□□□□ 0.25
R3HCC1-208ENST00000522012 KLHDC1Q8N7A1 406 aa16.61■□□□□ 0.25
R3HCC1-208ENST00000522012 TXN2Q99757 166 aa16.61■□□□□ 0.25
R3HCC1-208ENST00000522012 TIMM9Q9Y5J7 89 aa16.61■□□□□ 0.25
R3HCC1-208ENST00000522012 IGKV1D-37A0A075B6S9 117 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 TRBV7-1A0A0A6YYK4 115 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 A0A0G2JLM5 398 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 ZNF90Q03938 601 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 FAM74A1Q5RGS3 127 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 TMEM182Q6ZP80 229 aaPredicted RBP16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 CYP2G1PQ6ZSU1 146 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 OR5AU1Q8NGC0 362 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 OR4F5Q8NH21 305 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 PSMG3Q9BT73 122 aaPredicted RBP16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 TCRBV4S1A1TA0A5B7 111 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 OR2T8A6NH00 312 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 F8W735 103 aaPredicted RBP16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 IGHV3-11P01762 117 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 RPLP1P05386 114 aaKnown RBP16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 IGLC1P0CG04 106 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 TIGITQ495A1 244 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 MIC13Q5XKP0 118 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 CLEC19AQ6UXS0 136 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 COMMD1Q8N668 190 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 TRGV9Q99603 122 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 UBQLN2Q9UHD9 624 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 SLC45A2Q9UMX9 530 aa16.6■□□□□ 0.25
R3HCC1-208ENST00000522012 TRAV30A0A087WSZ9 112 aa16.59■□□□□ 0.25
R3HCC1-208ENST00000522012 CLEC3BP05452 202 aa16.59■□□□□ 0.25
R3HCC1-208ENST00000522012 FCGR2BP31994 310 aaPredicted RBP16.59■□□□□ 0.25
R3HCC1-208ENST00000522012 GPR183P32249 361 aa16.59■□□□□ 0.25
R3HCC1-208ENST00000522012 ELLP55199 621 aaPredicted RBP16.59■□□□□ 0.25
R3HCC1-208ENST00000522012 BPIFCQ8NFQ6 507 aa16.59■□□□□ 0.25
R3HCC1-208ENST00000522012 CCDC140Q96MF4 163 aa16.59■□□□□ 0.25
R3HCC1-208ENST00000522012 KCNIP2Q9NS61 270 aa16.59■□□□□ 0.25
R3HCC1-208ENST00000522012 PLA2G2EQ9NZK7 142 aa16.59■□□□□ 0.25
R3HCC1-208ENST00000522012 PXMP4Q9Y6I8 212 aa16.59■□□□□ 0.25
R3HCC1-208ENST00000522012 NSD1Q96L73 2696 aaPredicted RBP16.58■□□□□ 0.24
R3HCC1-208ENST00000522012 GATA2P23769 480 aaPredicted RBP16.58■□□□□ 0.24
R3HCC1-208ENST00000522012 RPL29P47914 159 aaKnown RBP16.58■□□□□ 0.24
R3HCC1-208ENST00000522012 FFAR4Q5NUL3 377 aa16.58■□□□□ 0.24
R3HCC1-208ENST00000522012 ZNF767PQ75MW2 155 aa16.58■□□□□ 0.24
R3HCC1-208ENST00000522012 GAR1Q9NY12 217 aaKnown RBP16.58■□□□□ 0.24
R3HCC1-208ENST00000522012 HAX1O00165 279 aa16.57■□□□□ 0.24
R3HCC1-208ENST00000522012 SCGB2A1O75556 95 aa16.57■□□□□ 0.24
R3HCC1-208ENST00000522012 TSPAN15O95858 294 aa16.57■□□□□ 0.24
R3HCC1-208ENST00000522012 SERF2P84101 59 aa16.57■□□□□ 0.24
R3HCC1-208ENST00000522012 STPG3Q8N7X2 389 aa16.57■□□□□ 0.24
R3HCC1-208ENST00000522012 NUPL2O15504 423 aaKnown RBP16.56■□□□□ 0.24
R3HCC1-208ENST00000522012 IGKV1-17P01599 117 aa16.56■□□□□ 0.24
R3HCC1-208ENST00000522012 B2MP61769 119 aa16.56■□□□□ 0.24
R3HCC1-208ENST00000522012 KIAA0141Q14154 515 aaPredicted RBP16.56■□□□□ 0.24
R3HCC1-208ENST00000522012 AKR1C8PQ5T2L2 129 aa16.56■□□□□ 0.24
R3HCC1-208ENST00000522012 RNF152Q8N8N0 203 aa16.56■□□□□ 0.24
R3HCC1-208ENST00000522012 OR4X2Q8NGF9 303 aa16.56■□□□□ 0.24
R3HCC1-208ENST00000522012 OR5B12Q96R08 314 aa16.56■□□□□ 0.24
R3HCC1-208ENST00000522012 GNB4Q9HAV0 340 aa16.56■□□□□ 0.24
R3HCC1-208ENST00000522012 SLC39A9Q9NUM3 307 aa16.56■□□□□ 0.24
R3HCC1-208ENST00000522012 RNF114Q9Y508 228 aa16.56■□□□□ 0.24
R3HCC1-208ENST00000522012 FABP1P07148 127 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 CTSGP08311 255 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 LINC00869P0C866 280 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 SELENOTP62341 195 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 PRR20EP86478 221 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 PRR20CP86479 221 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 PRR20DP86480 221 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 PRR20BP86481 221 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 PRR20AP86496 221 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 ZNF616Q08AN1 781 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 ZNF491Q8N8L2 437 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 CHRDL1Q9BU40 450 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 DNHD1Q96M86 4753 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 CLPSL1A2RUU4 121 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 ANKRD34BA5PLL1 514 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 RD3LP0DJH9 198 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 ZNF343Q6P1L6 599 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 ATP6V0BQ99437 205 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 VSIRQ9H7M9 311 aa16.55■□□□□ 0.24
R3HCC1-208ENST00000522012 CUBNO60494 3623 aa16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 UMAD1C9J7I0 102 aa16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 RGS13O14921 159 aa16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 TGOLN2O43493 480 aa16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 PSG1P11464 419 aa16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 SULT1A2P50226 295 aa16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 TCTEX1D4Q5JR98 221 aa16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 Q6ZRG5 221 aa16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 MYOZ3Q8TDC0 251 aa16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 WIPF2Q8TF74 440 aaPredicted RBP16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 RNF141Q8WVD5 230 aa16.54■□□□□ 0.24
R3HCC1-208ENST00000522012 PPP5D1E7EU14 171 aa16.53■□□□□ 0.24
R3HCC1-208ENST00000522012 YIF1AO95070 293 aa16.53■□□□□ 0.24
R3HCC1-208ENST00000522012 MBP02144 154 aa16.53■□□□□ 0.24
R3HCC1-208ENST00000522012 ADMP35318 185 aa16.53■□□□□ 0.24
R3HCC1-208ENST00000522012 RAB2AP61019 212 aa16.53■□□□□ 0.24
R3HCC1-208ENST00000522012 YPEL3P61236 119 aaPredicted RBP16.53■□□□□ 0.24
R3HCC1-208ENST00000522012 ACOT6Q3I5F7 207 aaPredicted RBP16.53■□□□□ 0.24
R3HCC1-208ENST00000522012 TMEM41BQ5BJD5 291 aa16.53■□□□□ 0.24
R3HCC1-208ENST00000522012 GCSAMLQ5JQS6 135 aa16.53■□□□□ 0.24
R3HCC1-208ENST00000522012 UBE2E2Q96LR5 201 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms