RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 HMSDA8MTL9 139 aa18.58■□□□□ 0.56
PVT1-212ENST00000521951 LINC01619G3V211 115 aa18.58■□□□□ 0.56
PVT1-212ENST00000521951 CCL24O00175 119 aa18.58■□□□□ 0.56
PVT1-212ENST00000521951 AKR1C1Q04828 323 aa18.58■□□□□ 0.56
PVT1-212ENST00000521951 ZNF616Q08AN1 781 aa18.58■□□□□ 0.56
PVT1-212ENST00000521951 SPSB3Q6PJ21 355 aa18.58■□□□□ 0.56
PVT1-212ENST00000521951 NPVFQ9HCQ7 196 aa18.58■□□□□ 0.56
PVT1-212ENST00000521951 WNK1Q9H4A3 2382 aa18.57■□□□□ 0.56
PVT1-212ENST00000521951 TRAV30A0A087WSZ9 112 aa18.57■□□□□ 0.56
PVT1-212ENST00000521951 GGCTO75223 188 aaKnown RBP18.57■□□□□ 0.56
PVT1-212ENST00000521951 IGLC1P0CG04 106 aa18.57■□□□□ 0.56
PVT1-212ENST00000521951 OR10J1P30954 320 aa18.57■□□□□ 0.56
PVT1-212ENST00000521951 CLINT1Q14677 625 aa18.57■□□□□ 0.56
PVT1-212ENST00000521951 TMEM144Q7Z5S9 345 aa18.57■□□□□ 0.56
PVT1-212ENST00000521951 TMEM147Q9BVK8 224 aa18.57■□□□□ 0.56
PVT1-212ENST00000521951 UQCC1Q9NVA1 299 aa18.57■□□□□ 0.56
PVT1-212ENST00000521951 IGKV1OR2-108A0A075B7D4 117 aa18.56■□□□□ 0.56
PVT1-212ENST00000521951 NUPL2O15504 423 aaKnown RBP18.56■□□□□ 0.56
PVT1-212ENST00000521951 OR2C1O95371 312 aa18.56■□□□□ 0.56
PVT1-212ENST00000521951 MYCNOSP40205 109 aa18.56■□□□□ 0.56
PVT1-212ENST00000521951 AP2S1P53680 142 aaPredicted RBP18.56■□□□□ 0.56
PVT1-212ENST00000521951 FHL3Q13643 280 aa18.56■□□□□ 0.56
PVT1-212ENST00000521951 VWC2Q2TAL6 325 aa18.56■□□□□ 0.56
PVT1-212ENST00000521951 TIGITQ495A1 244 aa18.56■□□□□ 0.56
PVT1-212ENST00000521951 TREML4Q6UXN2 200 aa18.56■□□□□ 0.56
PVT1-212ENST00000521951 THAP8Q8NA92 274 aa18.56■□□□□ 0.56
PVT1-212ENST00000521951 SMIM3Q9BZL3 60 aa18.56■□□□□ 0.56
PVT1-212ENST00000521951 MFFQ9GZY8 342 aa18.56■□□□□ 0.56
PVT1-212ENST00000521951 IGKV1D-37A0A075B6S9 117 aa18.55■□□□□ 0.56
PVT1-212ENST00000521951 IGKV1-17P01599 117 aa18.55■□□□□ 0.56
PVT1-212ENST00000521951 OR4F17Q8NGA8 305 aa18.55■□□□□ 0.56
PVT1-212ENST00000521951 OR4F4Q96R69 305 aa18.55■□□□□ 0.56
PVT1-212ENST00000521951 IGHV3-35A0A0C4DH35 117 aa18.54■□□□□ 0.56
PVT1-212ENST00000521951 HOXD3P31249 432 aaPredicted RBP18.54■□□□□ 0.56
PVT1-212ENST00000521951 RPEL1Q2QD12 228 aa18.54■□□□□ 0.56
PVT1-212ENST00000521951 WFDC1Q9HC57 220 aa18.54■□□□□ 0.56
PVT1-212ENST00000521951 ZFP92A6NM28 416 aa18.54■□□□□ 0.56
PVT1-212ENST00000521951 PFDN1O60925 122 aa18.54■□□□□ 0.56
PVT1-212ENST00000521951 ZP3P21754 424 aa18.54■□□□□ 0.56
PVT1-212ENST00000521951 SLURP1P55000 103 aa18.54■□□□□ 0.56
PVT1-212ENST00000521951 ZNF414Q96IQ9 312 aa18.54■□□□□ 0.56
PVT1-212ENST00000521951 FBXL17Q9UF56 701 aa18.54■□□□□ 0.56
PVT1-212ENST00000521951 SCGB2A1O75556 95 aa18.53■□□□□ 0.56
PVT1-212ENST00000521951 TEPPQ6URK8 271 aa18.53■□□□□ 0.56
PVT1-212ENST00000521951 HYLS1Q96M11 299 aa18.53■□□□□ 0.56
PVT1-212ENST00000521951 TRGV9Q99603 122 aa18.53■□□□□ 0.56
PVT1-212ENST00000521951 ATP5SQ99766 215 aa18.53■□□□□ 0.56
PVT1-212ENST00000521951 WDR83OSQ9Y284 106 aa18.53■□□□□ 0.56
PVT1-212ENST00000521951 LSM4Q9Y4Z0 139 aaKnown RBP18.53■□□□□ 0.56
PVT1-212ENST00000521951 UBE2L5PA0A1B0GUS4 154 aa18.52■□□□□ 0.56
PVT1-212ENST00000521951 M0QZ24 198 aa18.52■□□□□ 0.56
PVT1-212ENST00000521951 CXCL2P19875 107 aa18.52■□□□□ 0.56
PVT1-212ENST00000521951 EIF2B2P49770 351 aaKnown RBP18.52■□□□□ 0.56
PVT1-212ENST00000521951 YPEL3P61236 119 aaPredicted RBP18.52■□□□□ 0.56
PVT1-212ENST00000521951 OR2F1Q13607 317 aa18.52■□□□□ 0.56
PVT1-212ENST00000521951 ZFP69Q49AA0 526 aa18.52■□□□□ 0.56
PVT1-212ENST00000521951 GPHB5Q86YW7 130 aa18.52■□□□□ 0.56
PVT1-212ENST00000521951 SPATA3Q8NHX4 192 aa18.52■□□□□ 0.56
PVT1-212ENST00000521951 ANK2Q01484 3957 aa18.51■□□□□ 0.55
PVT1-212ENST00000521951 DFFBO76075 338 aa18.51■□□□□ 0.55
PVT1-212ENST00000521951 TSPAN15O95858 294 aa18.51■□□□□ 0.55
PVT1-212ENST00000521951 PF4P02776 101 aa18.51■□□□□ 0.55
PVT1-212ENST00000521951 ZNF90Q03938 601 aa18.51■□□□□ 0.55
PVT1-212ENST00000521951 RELQ04864 619 aaPredicted RBP18.51■□□□□ 0.55
PVT1-212ENST00000521951 KLF5Q13887 457 aaPredicted RBP18.51■□□□□ 0.55
PVT1-212ENST00000521951 ZNF345Q14585 488 aa18.5■□□□□ 0.55
PVT1-212ENST00000521951 ZNF600Q6ZNG1 722 aa18.5■□□□□ 0.55
PVT1-212ENST00000521951 KCNRGQ8N5I3 272 aa18.5■□□□□ 0.55
PVT1-212ENST00000521951 DLX4Q92988 240 aaPredicted RBP18.5■□□□□ 0.55
PVT1-212ENST00000521951 FAM106AQ4KMX7 169 aa18.49■□□□□ 0.55
PVT1-212ENST00000521951 BTNL8Q6UX41 500 aa18.49■□□□□ 0.55
PVT1-212ENST00000521951 A0A0D9SG52 128 aa18.49■□□□□ 0.55
PVT1-212ENST00000521951 NDUFA4O00483 81 aa18.49■□□□□ 0.55
PVT1-212ENST00000521951 TOMM40O96008 361 aa18.49■□□□□ 0.55
PVT1-212ENST00000521951 FGF7P21781 194 aa18.49■□□□□ 0.55
PVT1-212ENST00000521951 SYNJ2BPP57105 145 aa18.49■□□□□ 0.55
PVT1-212ENST00000521951 MGST2Q99735 147 aa18.49■□□□□ 0.55
PVT1-212ENST00000521951 PUS1Q9Y606 427 aaKnown RBP eCLIP18.49■□□□□ 0.55
PVT1-212ENST00000521951 AGPAT2O15120 278 aa18.48■□□□□ 0.55
PVT1-212ENST00000521951 IFNA5P01569 189 aa18.48■□□□□ 0.55
PVT1-212ENST00000521951 RD3LP0DJH9 198 aa18.48■□□□□ 0.55
PVT1-212ENST00000521951 PSG1P11464 419 aa18.48■□□□□ 0.55
PVT1-212ENST00000521951 LGALSLQ3ZCW2 172 aaPredicted RBP18.48■□□□□ 0.55
PVT1-212ENST00000521951 TOMM20LQ6UXN7 152 aa18.48■□□□□ 0.55
PVT1-212ENST00000521951 CYP2G1PQ6ZSU1 146 aa18.48■□□□□ 0.55
PVT1-212ENST00000521951 C1QL4Q86Z23 238 aa18.48■□□□□ 0.55
PVT1-212ENST00000521951 Q8WTZ3 238 aa18.48■□□□□ 0.55
PVT1-212ENST00000521951 WDR61Q9GZS3 305 aaKnown RBP18.48■□□□□ 0.55
PVT1-212ENST00000521951 FABP1P07148 127 aa18.47■□□□□ 0.55
PVT1-212ENST00000521951 UNQ9165/PRO28630Q6UXU0 137 aa18.47■□□□□ 0.55
PVT1-212ENST00000521951 TMEM182Q6ZP80 229 aaPredicted RBP18.47■□□□□ 0.55
PVT1-212ENST00000521951 LINC00482Q8N8I6 264 aa18.47■□□□□ 0.55
PVT1-212ENST00000521951 RCC1LQ96I51 464 aaKnown RBP18.47■□□□□ 0.55
PVT1-212ENST00000521951 IGHV3OR16-8A0A075B7F1 116 aa18.46■□□□□ 0.55
PVT1-212ENST00000521951 ZNF320A2RRD8 509 aa18.46■□□□□ 0.55
PVT1-212ENST00000521951 MPDU1O75352 247 aa18.46■□□□□ 0.55
PVT1-212ENST00000521951 YIF1AO95070 293 aa18.46■□□□□ 0.55
PVT1-212ENST00000521951 GATA2P23769 480 aaPredicted RBP18.46■□□□□ 0.55
PVT1-212ENST00000521951 CAMLGP49069 296 aa18.46■□□□□ 0.55
PVT1-212ENST00000521951 RAB31Q13636 194 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms