RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 ZNF329Q86UD4 541 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 CBLN2Q8IUK8 224 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 KLHL30-AS1Q8NEE0 82 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 OR4A16Q8NH70 328 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 SFT2D1Q8WV19 159 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 MBD3L1Q8WWY6 194 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 CIB3Q96Q77 187 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 PSMG3Q9BT73 122 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 PBDC1Q9BVG4 233 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 TMEM147Q9BVK8 224 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 SCRT2Q9NQ03 307 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 SLC25A10Q9UBX3 287 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 PRELID3BQ9Y3B1 194 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 LINC00312Q9Y6C7 94 aa5.61□□□□□ -1.51
CTNNA1-227ENST00000521387 VPS13BQ7Z7G8 4022 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 TRAV1-1A0A0B4J248 108 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 SH2D7A6NKC9 451 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 RBMXL2O75526 392 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 EIF3GO75821 320 aaKnown RBP eCLIP5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 CDK2AP2O75956 126 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 SCAF4O95104 1147 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 IFNA17P01571 189 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 HBE1P02100 147 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 IL6RP08887 468 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 CT45A6P0DMU7 189 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 CT45A5P0DMU8 189 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 CT45A7P0DMV0 189 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 MYOD1P15172 320 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 NQO2P16083 231 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 FGF7P21781 194 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 DLX6P56179 175 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 ERVK-16P61578 105 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 RPL31P62899 125 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 SERF2P84101 59 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 TMEM30BQ3MIR4 351 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 AKIRIN2Q53H80 203 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 ACSM6Q6P461 480 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 SLC25A48Q6ZT89 311 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 OR10P1Q8NGE3 313 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 OR10A7Q8NGE5 316 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 OR4S2Q8NH73 311 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 RXFP4Q8TDU9 374 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 ADTRPQ96IZ2 230 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 AIFM2Q9BRQ8 373 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 SLC35B3Q9H1N7 401 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 HIPK2Q9H2X6 1198 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 TMEM140Q9NV12 185 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 KAAG1Q9UBP8 84 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 TIMM9Q9Y5J7 89 aa5.6□□□□□ -1.51
CTNNA1-227ENST00000521387 LOC102723971A0A1B0GUV8 181 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 C7orf77A4D0Y5 90 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 SRRM4A7MD48 611 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 RRHO14718 337 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 NDUFB3O43676 98 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 IGKV1D-33P01593 117 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 IGKV1-33P01594 117 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 AMY1AP04745 511 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 ARG1P05089 322 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 AKR1C3P42330 323 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 FGF8P55075 233 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 ELLP55199 621 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 RAB2AP61019 212 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 FHL3Q13643 280 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 HNF4GQ14541 408 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 POU2AF1Q16633 256 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 VWC2Q2TAL6 325 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 TMEM41BQ5BJD5 291 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 OR4A47Q6IF82 309 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 CEMP1Q6PRD7 247 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 LCN15Q6UWW0 184 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 ABHD12Q8N2K0 398 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 OR52E5Q8NH55 327 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 TMEM170AQ8WVE7 144 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 H1FXQ92522 213 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 SMDT1Q9H4I9 107 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 SLC35D1Q9NTN3 355 aa5.59□□□□□ -1.51
CTNNA1-227ENST00000521387 PRSS29PA6NIE9 313 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 C15orf61A6NNL5 157 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 COLCA2A8K830 154 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 PRSS46E5RG02 174 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 M0R1W7 72 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 UPK2O00526 184 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 RTL8CO15255 209 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 NDUFA2O43678 99 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 HRASP01112 189 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 IFNA10P01566 189 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 HSPE1P61604 102 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 PMS2P11Q13670 270 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 KHDC3LQ587J8 217 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 LRRC10Q5BKY1 277 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 FFAR4Q5NUL3 377 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 HEPN1Q6WQI6 88 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 ZNF833PQ6ZTB9 187 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 LINC00311Q8N616 119 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 OR13D1Q8NGV5 346 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 ZNF596Q8TC21 504 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 PINX1Q96BK5 328 aaKnown RBP5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 RHOVQ96L33 236 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 ZNF714Q96N38 554 aa5.58□□□□□ -1.52
CTNNA1-227ENST00000521387 CLCC1Q96S66 551 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms