RNA–Protein interactions for RNA: ENST00000521327.1

SPARC-203, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 864 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-203ENST00000521327 TMEM189A5PLL7 270 aa9.65□□□□□ -0.86
SPARC-203ENST00000521327 HTN3P15516 51 aa9.65□□□□□ -0.86
SPARC-203ENST00000521327 PI3P19957 117 aa9.65□□□□□ -0.86
SPARC-203ENST00000521327 RPS19P39019 145 aaKnown RBP9.65□□□□□ -0.86
SPARC-203ENST00000521327 FXYD7P58549 80 aa9.65□□□□□ -0.86
SPARC-203ENST00000521327 DHODHQ02127 395 aa9.65□□□□□ -0.86
SPARC-203ENST00000521327 RNF212Q495C1 297 aa9.65□□□□□ -0.86
SPARC-203ENST00000521327 TP53RKQ96S44 253 aa9.65□□□□□ -0.86
SPARC-203ENST00000521327 SMIM9A6NGZ8 99 aa9.64□□□□□ -0.87
SPARC-203ENST00000521327 ZNF705FA8MVS1 300 aaPredicted RBP9.64□□□□□ -0.87
SPARC-203ENST00000521327 ATG12O94817 140 aa9.64□□□□□ -0.87
SPARC-203ENST00000521327 IGKV3-20P01619 116 aa9.64□□□□□ -0.87
SPARC-203ENST00000521327 IGLC1P0CG04 106 aa9.64□□□□□ -0.87
SPARC-203ENST00000521327 ZNF705DP0CH99 300 aaPredicted RBP9.64□□□□□ -0.87
SPARC-203ENST00000521327 ZNF705BP0CI00 300 aaPredicted RBP9.64□□□□□ -0.87
SPARC-203ENST00000521327 HLA-DRB4P13762 266 aa9.64□□□□□ -0.87
SPARC-203ENST00000521327 PIGPP57054 158 aa9.64□□□□□ -0.87
SPARC-203ENST00000521327 NEDD8Q15843 81 aa9.64□□□□□ -0.87
SPARC-203ENST00000521327 OR1S2Q8NGQ3 325 aa9.64□□□□□ -0.87
SPARC-203ENST00000521327 YTHDF1Q9BYJ9 559 aaKnown RBP9.64□□□□□ -0.87
SPARC-203ENST00000521327 SEPSECSQ9HD40 501 aaKnown RBP9.64□□□□□ -0.87
SPARC-203ENST00000521327 NRN1Q9NPD7 142 aa9.64□□□□□ -0.87
SPARC-203ENST00000521327 DKK2Q9UBU2 259 aa9.64□□□□□ -0.87
SPARC-203ENST00000521327 HLA-DRB4X5D2U9 266 aa9.64□□□□□ -0.87
SPARC-203ENST00000521327 LRP1BQ9NZR2 4599 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 RPS10-NUDT3A0A1W2PQS6 291 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 C16orf90A8MZG2 172 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 M0QYG6 137 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 IL4P05112 153 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 OR10J1P30954 320 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 RCVRNP35243 200 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 RND2P52198 227 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 DEFB1P60022 68 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 YPEL3P61236 119 aaPredicted RBP9.63□□□□□ -0.87
SPARC-203ENST00000521327 RND3P61587 244 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 USF2Q15853 346 aaPredicted RBP9.63□□□□□ -0.87
SPARC-203ENST00000521327 TRIM16LQ309B1 348 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 BSXQ3C1V8 233 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 SP6Q3SY56 376 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 GDF5OSQ5U4N7 250 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 FAM222AQ5U5X8 452 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 PRSS54Q6PEW0 395 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 SIGLEC15Q6ZMC9 328 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 SNX29P2Q8IUI4 249 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 NIPSNAP3BQ9BS92 247 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 SCPEP1Q9HB40 452 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 RFNGQ9Y644 331 aa9.63□□□□□ -0.87
SPARC-203ENST00000521327 A0A0G2JRQ6 117 aa9.62□□□□□ -0.87
SPARC-203ENST00000521327 C3orf85A0A1B0GTC6 90 aa9.62□□□□□ -0.87
SPARC-203ENST00000521327 SMIM31A0A1B0GVY4 71 aa9.62□□□□□ -0.87
SPARC-203ENST00000521327 BUB3O43684 328 aa9.62□□□□□ -0.87
SPARC-203ENST00000521327 HTR2BP41595 481 aa9.62□□□□□ -0.87
SPARC-203ENST00000521327 NKX2-1P43699 371 aaPredicted RBP9.62□□□□□ -0.87
SPARC-203ENST00000521327 MAPKAPK5-AS1Q8N8E1 139 aa9.62□□□□□ -0.87
SPARC-203ENST00000521327 RNASE11Q8TAA1 199 aaKnown RBP9.62□□□□□ -0.87
SPARC-203ENST00000521327 RRNAD1Q96FB5 475 aaKnown RBP9.62□□□□□ -0.87
SPARC-203ENST00000521327 ZNF486Q96H40 463 aaPredicted RBP9.62□□□□□ -0.87
SPARC-203ENST00000521327 TEX48A0A1B0GUV7 120 aa9.61□□□□□ -0.87
SPARC-203ENST00000521327 RD3LP0DJH9 198 aa9.61□□□□□ -0.87
SPARC-203ENST00000521327 SLC25A4P12235 298 aa9.61□□□□□ -0.87
SPARC-203ENST00000521327 SPCS3P61009 180 aa9.61□□□□□ -0.87
SPARC-203ENST00000521327 LSM3P62310 102 aaKnown RBP9.61□□□□□ -0.87
SPARC-203ENST00000521327 TNP2Q05952 138 aa9.61□□□□□ -0.87
SPARC-203ENST00000521327 TMEM88Q6PEY1 159 aa9.61□□□□□ -0.87
SPARC-203ENST00000521327 LINC00052Q96N35 136 aa9.61□□□□□ -0.87
SPARC-203ENST00000521327 HEYLQ9NQ87 328 aaPredicted RBP9.61□□□□□ -0.87
SPARC-203ENST00000521327 COMMD3Q9UBI1 195 aa9.61□□□□□ -0.87
SPARC-203ENST00000521327 GSTZ1O43708 216 aaPredicted RBP9.6□□□□□ -0.87
SPARC-203ENST00000521327 CDK2AP2O75956 126 aa9.6□□□□□ -0.87
SPARC-203ENST00000521327 OR4B1Q8NGF8 309 aa9.6□□□□□ -0.87
SPARC-203ENST00000521327 NPIPB3Q92617 1050 aa9.6□□□□□ -0.87
SPARC-203ENST00000521327 Q9H521 79 aa9.6□□□□□ -0.87
SPARC-203ENST00000521327 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.6□□□□□ -0.87
SPARC-203ENST00000521327 COPZ2Q9P299 210 aa9.6□□□□□ -0.87
SPARC-203ENST00000521327 TMED3Q9Y3Q3 217 aa9.6□□□□□ -0.87
SPARC-203ENST00000521327 YTHDF2Q9Y5A9 579 aaKnown RBP9.6□□□□□ -0.87
SPARC-203ENST00000521327 APOA1P02647 267 aa9.59□□□□□ -0.87
SPARC-203ENST00000521327 OXA1LQ15070 435 aa9.59□□□□□ -0.87
SPARC-203ENST00000521327 C2orf83Q53S99 150 aa9.59□□□□□ -0.87
SPARC-203ENST00000521327 DMRTA1Q5VZB9 504 aa9.59□□□□□ -0.87
SPARC-203ENST00000521327 LHFPL1Q86WI0 220 aa9.59□□□□□ -0.87
SPARC-203ENST00000521327 ZNF709Q8N972 641 aa9.59□□□□□ -0.87
SPARC-203ENST00000521327 OR51G1Q8NGK1 321 aa9.59□□□□□ -0.87
SPARC-203ENST00000521327 OR52E5Q8NH55 327 aa9.59□□□□□ -0.87
SPARC-203ENST00000521327 RNASEH2CQ8TDP1 164 aaKnown RBP9.59□□□□□ -0.87
SPARC-203ENST00000521327 ACY3Q96HD9 319 aa9.59□□□□□ -0.87
SPARC-203ENST00000521327 C7orf50Q9BRJ6 194 aaKnown RBP9.59□□□□□ -0.87
SPARC-203ENST00000521327 WDR12Q9GZL7 423 aaKnown RBP9.59□□□□□ -0.87
SPARC-203ENST00000521327 SLC35B3Q9H1N7 401 aa9.59□□□□□ -0.87
SPARC-203ENST00000521327 SAV1Q9H4B6 383 aaPredicted RBP9.59□□□□□ -0.87
SPARC-203ENST00000521327 LOC102723971A0A1B0GUV8 181 aa9.58□□□□□ -0.88
SPARC-203ENST00000521327 NXPH3O95157 252 aa9.58□□□□□ -0.88
SPARC-203ENST00000521327 TOMM40O96008 361 aa9.58□□□□□ -0.88
SPARC-203ENST00000521327 HBE1P02100 147 aa9.58□□□□□ -0.88
SPARC-203ENST00000521327 PSG1P11464 419 aa9.58□□□□□ -0.88
SPARC-203ENST00000521327 UCP1P25874 307 aa9.58□□□□□ -0.88
SPARC-203ENST00000521327 ID1P41134 155 aa9.58□□□□□ -0.88
SPARC-203ENST00000521327 RNASE12Q5GAN4 147 aaKnown RBP9.58□□□□□ -0.88
SPARC-203ENST00000521327 RNASE10Q5GAN6 216 aaKnown RBP9.58□□□□□ -0.88
SPARC-203ENST00000521327 ETFRF1Q6IPR1 90 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms