RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 ZNF436Q9C0F3 470 aaPredicted RBP4.22□□□□□ -1.73
PABPC1-216ENST00000520868 C6orf62Q9GZU0 229 aaPredicted RBP4.22□□□□□ -1.73
PABPC1-216ENST00000520868 BET1LQ9NYM9 111 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 THYN1Q9P016 225 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 KLK9Q9UKQ9 250 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 TPRKBQ9Y3C4 175 aa4.22□□□□□ -1.73
PABPC1-216ENST00000520868 IGHV3OR16-13A0A075B7E8 117 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 IGHV3-49A0A0A0MS15 119 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 IGHV3-74A0A0B4J1X5 117 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 TRAV1-2A0A0B4J238 106 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 IGLC7A0M8Q6 106 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 IFITM5A6NNB3 132 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 MPTX1A8MV57 137 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 IGLL5B9A064 214 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 SULT1C2O00338 296 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 UPK2O00526 184 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 XRCC3O43542 346 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 OR13C7P0DN81 318 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 VPREB1P12018 145 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 PTHLHP12272 177 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 RAB3BP20337 219 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 GNG2P59768 71 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 HERV-K104P61576 105 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 ARL6IP1Q15041 203 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 TIMM50Q3ZCQ8 353 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 HACD4Q5VWC8 232 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 ZNF773Q6PK81 442 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 OR11H2Q8NH07 326 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 OR4A5Q8NH83 315 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 VN1R17PQ8TDU5 208 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 RNF2Q99496 336 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 HINT2Q9BX68 163 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 COMMD5Q9GZQ3 224 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 MFFQ9GZY8 342 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 DCSTAMPQ9H295 470 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 DUSP21Q9H596 190 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 ACOT13Q9NPJ3 140 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 DAZ1Q9NQZ3 744 aaKnown RBP4.21□□□□□ -1.74
PABPC1-216ENST00000520868 ANXA10Q9UJ72 324 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 APLNQ9ULZ1 77 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 HSPG2P98160 4391 aa4.21□□□□□ -1.74
PABPC1-216ENST00000520868 TEX50A0A1B0GTY4 177 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 TMEM235A6NFC5 223 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 ERICH4A6NGS2 130 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 NDUFA4O00483 81 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 CYB5BO43169 146 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 SSX5O60225 188 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 YIF1AO95070 293 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 HPRT1P00492 218 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 FCER2P06734 321 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 SERPINE2P07093 398 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 TRAPPC2P0DI81 140 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 TRAPPC2BP0DI82 140 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 NQO2P16083 231 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 MYL9P24844 172 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 FCGR2CP31995 323 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 MFAP2P55001 183 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 MFAP4P55083 255 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 TAS2R31P59538 309 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 ARPC4P59998 168 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 WT1-ASQ06250 92 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 SSX1Q16384 188 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 Q56UQ5 140 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 C22orf42Q6IC83 251 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 GVQW1Q8N7I0 195 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 GDPD1Q8N9F7 314 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 SAT2Q96F10 170 aaPredicted RBP4.2□□□□□ -1.74
PABPC1-216ENST00000520868 BSCL2Q96G97 398 aaPredicted RBP4.2□□□□□ -1.74
PABPC1-216ENST00000520868 RHPN1-AS1Q9BWJ2 59 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 SLC5A7Q9GZV3 580 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 C21orf62Q9NYP8 219 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 SMPXQ9UHP9 88 aa4.2□□□□□ -1.74
PABPC1-216ENST00000520868 IGHV7-4-1A0A0J9YVY3 117 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 TRDV1A0A1B0GX56 115 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 K7EMT4 169 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 CHEK1O14757 476 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 CASQ2O14958 399 aaPredicted RBP4.19□□□□□ -1.74
PABPC1-216ENST00000520868 RBFOX2O43251 390 aaKnown RBP eCLIP4.19□□□□□ -1.74
PABPC1-216ENST00000520868 MRPS14O60783 128 aaKnown RBP4.19□□□□□ -1.74
PABPC1-216ENST00000520868 CA1P00915 261 aaPredicted RBP4.19□□□□□ -1.74
PABPC1-216ENST00000520868 PPYP01298 95 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 CTSGP08311 255 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 CMC4P56277 68 aaPredicted RBP4.19□□□□□ -1.74
PABPC1-216ENST00000520868 TCTAP57738 103 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 FXYD4P59646 89 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 CATR1Q13166 79 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 AADACL3Q5VUY0 350 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 ZNF818PQ6ZRF7 136 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 PRSS48Q7RTY5 328 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 BEST4Q8NFU0 473 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 OR1L8Q8NGR8 309 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 OR13F1Q8NGS4 319 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 OR51H1Q8NH63 302 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 VCXQ9H320 206 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 C11orf68Q9H3H3 251 aaKnown RBP4.19□□□□□ -1.74
PABPC1-216ENST00000520868 NSG2Q9Y328 171 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 ETV7Q9Y603 341 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 LRP1BQ9NZR2 4599 aa4.19□□□□□ -1.74
PABPC1-216ENST00000520868 TRAV18A0A075B6X5 111 aa4.18□□□□□ -1.74
PABPC1-216ENST00000520868 TRAV14DV4A0A0A6YYC5 116 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms