RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ADAMTS20P59510 1910 aa10.47□□□□□ -0.73
TRAPPC9-208ENST00000520857 TEX50A0A1B0GTY4 177 aa10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 PRCDQ00LT1 54 aa10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 CD69Q07108 199 aa10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 DUX4L9Q6RFH8 374 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 GCSAMQ8N6F7 178 aa10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 OR1L8Q8NGR8 309 aa10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 ZC2HC1AQ96GY0 325 aa10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 NAA38Q9BRA0 125 aaKnown RBP10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 SPTA1P02549 2419 aa10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 UPK2O00526 184 aa10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 C1orf229Q6ZS94 237 aaPredicted RBP10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 ZPBPQ9BS86 351 aa10.46□□□□□ -0.73
TRAPPC9-208ENST00000520857 LOC105371242A0A075B767 164 aa10.46□□□□□ -0.74
TRAPPC9-208ENST00000520857 TRAV30A0A087WSZ9 112 aa10.46□□□□□ -0.74
TRAPPC9-208ENST00000520857 PPIAL4DF5H284 164 aa10.46□□□□□ -0.74
TRAPPC9-208ENST00000520857 K7ERU9 68 aa10.46□□□□□ -0.74
TRAPPC9-208ENST00000520857 IGLV2-8P01709 118 aa10.46□□□□□ -0.74
TRAPPC9-208ENST00000520857 SUB1P53999 127 aaKnown RBP eCLIP10.46□□□□□ -0.74
TRAPPC9-208ENST00000520857 OR10X1Q8NGY0 326 aa10.46□□□□□ -0.74
TRAPPC9-208ENST00000520857 PRSS3P2Q8NHM4 247 aa10.46□□□□□ -0.74
TRAPPC9-208ENST00000520857 C19orf24Q9BVV8 132 aa10.46□□□□□ -0.74
TRAPPC9-208ENST00000520857 IGHV2-70DA0A0C4DH43 119 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 SERTM2A0A1B0GWG4 89 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 GDF5OSQ5U4N7 250 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 PEAR1Q5VY43 1037 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 DHRS13Q6UX07 377 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 FA2HQ7L5A8 372 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 FAM216BQ8N7L0 139 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 OR8A1Q8NGG7 326 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 MRPL32Q9BYC8 188 aaKnown RBP10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 TANC2Q9HCD6 1990 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 KBTBD11-OT1A0A1B0GTJ5 212 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 SRRM5B3KS81 715 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 SYS1-DBNDD2H3BUS1 97 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 DLL1O00548 723 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 LOXL3P58215 753 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 BPIFA4PQ86YQ2 179 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 MUC15Q8N387 334 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 CST9LQ9H4G1 147 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 ZNF430Q9H8G1 570 aaPredicted RBP10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 CACNA1BQ00975 2339 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 hADV38S2A0JD32 116 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 CDKN1BP46527 198 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 NHLH1Q02575 133 aa10.45□□□□□ -0.74
TRAPPC9-208ENST00000520857 DSPP15924 2871 aaKnown RBP10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 GAGE10A6NGK3 116 aa10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 SRRM4A7MD48 611 aaKnown RBP10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 SSBP2P81877 361 aaPredicted RBP10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 ST20Q9HBF5 79 aa10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 PROCRQ9UNN8 238 aa10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 IGHV3-72A0A0B4J1Y9 119 aa10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 LOC389332A0A1B0GUA5 103 aa10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 OR5AL1P0C617 328 aa10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 RNASE2P10153 161 aaKnown RBP10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 LRRC10Q5BKY1 277 aa10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 PRNTQ86SH4 94 aa10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 RAB37Q96AX2 223 aa10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 IGF2BP2-AS1Q96M15 143 aa10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 RPP21Q9H633 154 aaKnown RBP10.44□□□□□ -0.74
TRAPPC9-208ENST00000520857 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 HLA-DRB1P01911 266 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 RIPPLY3P57055 190 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 ARF6P62330 175 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 OCIAD2Q56VL3 154 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 SLC25A2Q9BXI2 301 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 TOMM40O96008 361 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 NBEAP1P0C6P0 100 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 SPRNQ5BIV9 151 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 GPR82Q96P67 336 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 MRPL20Q9BYC9 149 aaKnown RBP10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 EPDR1Q9UM22 224 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 TRAV8-1A0A0A6YYK1 113 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 TNFAIP6P98066 277 aaPredicted RBP10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 ZNF329Q86UD4 541 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 ARRDC1-AS1Q9H2J1 176 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 HSPB8Q9UJY1 196 aa10.43□□□□□ -0.74
TRAPPC9-208ENST00000520857 MED13LQ71F56 2210 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 C2orf70A6NJV1 201 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 H0YJW9 148 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 LIPFP07098 398 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 LYZP61626 148 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 TMEM116Q8NCL8 245 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 PERPQ96FX8 193 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 ASCL2Q99929 193 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 FNDC4Q9H6D8 234 aaPredicted RBP10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 TMSB15BA0A087X1C1 80 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 IGHV1-24A0A0C4DH33 117 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 F2RL2O00254 374 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 SLC25A17O43808 307 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 C2orf83Q53S99 150 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 C9orf106Q8NAJ2 232 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 RNF7Q9UBF6 113 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 NBASA2RRP1 2371 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 C21orf140B9A014 251 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 PSG9Q00887 426 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 SPATA12Q7Z6I5 190 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 OR4F17Q8NGA8 305 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 HILPDAQ9Y5L2 63 aa10.42□□□□□ -0.74
TRAPPC9-208ENST00000520857 SPTBN1Q01082 2364 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms