RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 ECSCRQ19T08 205 aa12.56□□□□□ -0.4
SNHG6-201ENST00000520348 GATAD1Q8WUU5 269 aa12.56□□□□□ -0.4
SNHG6-201ENST00000520348 RNF2Q99496 336 aa12.56□□□□□ -0.4
SNHG6-201ENST00000520348 TXN2Q99757 166 aa12.56□□□□□ -0.4
SNHG6-201ENST00000520348 MRPL32Q9BYC8 188 aaKnown RBP12.56□□□□□ -0.4
SNHG6-201ENST00000520348 ITPR2Q14571 2701 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 TRAV41A0A0B4J266 112 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 RBFOX3A6NFN3 312 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 G3V318 75 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 H3BUA1 57 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 SMAD7O15105 426 aaKnown RBP12.55□□□□□ -0.4
SNHG6-201ENST00000520348 BCL2P10415 239 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 ADCYAP1P18509 176 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 GATA2P23769 480 aaPredicted RBP12.55□□□□□ -0.4
SNHG6-201ENST00000520348 PPIFP30405 207 aaKnown RBP12.55□□□□□ -0.4
SNHG6-201ENST00000520348 TAGLN2P37802 199 aaKnown RBP12.55□□□□□ -0.4
SNHG6-201ENST00000520348 NPBWR1P48145 328 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 FGF8P55075 233 aaPredicted RBP12.55□□□□□ -0.4
SNHG6-201ENST00000520348 KHDC3LQ587J8 217 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 SLC35E3Q7Z769 313 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 OR5T1Q8NG75 326 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 ATP6V0BQ99437 205 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 TMUB1Q9BVT8 246 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 TMEM231Q9H6L2 316 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 SEPSECSQ9HD40 501 aaKnown RBP12.55□□□□□ -0.4
SNHG6-201ENST00000520348 FUT9Q9Y231 359 aa12.55□□□□□ -0.4
SNHG6-201ENST00000520348 CARHSP1Q9Y2V2 147 aaKnown RBP12.55□□□□□ -0.4
SNHG6-201ENST00000520348 ZANQ9Y493 2812 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 HECTD1Q9ULT8 2610 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 TRAV30A0A087WSZ9 112 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 IGHV3-21A0A0B4J1V1 117 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 A0A1B0GV50 99 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 A0A1W2PPV4 95 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 PSMB3P49720 205 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 MFAP4P55083 255 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 CFHR3Q02985 330 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 ICAM4Q14773 271 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 TMEM86BQ8N661 226 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 OR1L4Q8NGR5 311 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 TMEM37Q8WXS4 190 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 PFDN5Q99471 154 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 TMEM160Q9NX00 188 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 C21orf62Q9NYP8 219 aa12.54□□□□□ -0.4
SNHG6-201ENST00000520348 AP4M1O00189 453 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 OR2J3O76001 311 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 IFNA1P01562 189 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 HSPB1P04792 205 aaKnown RBP12.53□□□□□ -0.4
SNHG6-201ENST00000520348 PPT1P50897 306 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 YPEL3P61236 119 aaPredicted RBP12.53□□□□□ -0.4
SNHG6-201ENST00000520348 BLCAPP62952 87 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 SPATA31B1PQ5VZV4 182 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 PATE2Q6UY27 113 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 NECAP1Q8NC96 275 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 SUN5Q8TC36 379 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 SEC11CQ9BY50 192 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 TREM1Q9NP99 234 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 MANBALQ9NQG1 85 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 FBXL7Q9UJT9 491 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 CSMD1Q96PZ7 3565 aa12.53□□□□□ -0.4
SNHG6-201ENST00000520348 AKAP9Q99996 3911 aa12.52□□□□□ -0.4
SNHG6-201ENST00000520348 ELOA3CA0A087WX78 387 aaPredicted RBP12.52□□□□□ -0.41
SNHG6-201ENST00000520348 EIF3GO75821 320 aaKnown RBP eCLIP12.52□□□□□ -0.41
SNHG6-201ENST00000520348 CXorf1O96002 111 aa12.52□□□□□ -0.41
SNHG6-201ENST00000520348 TOMM40O96008 361 aa12.52□□□□□ -0.41
SNHG6-201ENST00000520348 FABP1P07148 127 aa12.52□□□□□ -0.41
SNHG6-201ENST00000520348 TIGITQ495A1 244 aa12.52□□□□□ -0.41
SNHG6-201ENST00000520348 FAM78BQ5VT40 261 aa12.52□□□□□ -0.41
SNHG6-201ENST00000520348 MIR17HGQ75NE6 70 aa12.52□□□□□ -0.41
SNHG6-201ENST00000520348 ZNF502Q8TBZ5 544 aa12.52□□□□□ -0.41
SNHG6-201ENST00000520348 FAM167A-AS1Q96KT0 104 aa12.52□□□□□ -0.41
SNHG6-201ENST00000520348 GSX1Q9H4S2 264 aaPredicted RBP12.52□□□□□ -0.41
SNHG6-201ENST00000520348 DNAJC4Q9NNZ3 241 aa12.52□□□□□ -0.41
SNHG6-201ENST00000520348 GNG13Q9P2W3 67 aa12.52□□□□□ -0.41
SNHG6-201ENST00000520348 ARL2-SNX15V9GYD0 113 aa12.52□□□□□ -0.41
SNHG6-201ENST00000520348 FLNAP21333 2647 aaKnown RBP12.52□□□□□ -0.41
SNHG6-201ENST00000520348 FAM223BA6NKX1 122 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 HMGB3O15347 200 aaKnown RBP12.51□□□□□ -0.41
SNHG6-201ENST00000520348 SRP19P09132 144 aaKnown RBP12.51□□□□□ -0.41
SNHG6-201ENST00000520348 SFTA3P0C7M3 94 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 ARL14EPLP0DKL9 152 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 RHOGP84095 191 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 HAGHQ16775 308 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 RBMS3Q6XE24 437 aaKnown RBP12.51□□□□□ -0.41
SNHG6-201ENST00000520348 SPNS3Q6ZMD2 512 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 Q6ZS46 218 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 FAM223AQ8IWN6 122 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 ZNF503Q96F45 646 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 ZNF414Q96IQ9 312 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 RARRES2Q99969 163 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 EIF5A2Q9GZV4 153 aaKnown RBP12.51□□□□□ -0.41
SNHG6-201ENST00000520348 SLC35B3Q9H1N7 401 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 TMPRSS5Q9H3S3 457 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 TECRQ9NZ01 308 aaKnown RBP12.51□□□□□ -0.41
SNHG6-201ENST00000520348 VAX2Q9UIW0 290 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 SVEP1Q4LDE5 3571 aa12.51□□□□□ -0.41
SNHG6-201ENST00000520348 HOXA3O43365 443 aaPredicted RBP12.5□□□□□ -0.41
SNHG6-201ENST00000520348 COX7A2P2O60397 106 aa12.5□□□□□ -0.41
SNHG6-201ENST00000520348 OR2C1O95371 312 aa12.5□□□□□ -0.41
SNHG6-201ENST00000520348 IGLV1-40P01703 118 aa12.5□□□□□ -0.41
SNHG6-201ENST00000520348 C8orf88P0DMB2 117 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms