RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 CRYBB3P26998 211 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 P2RY1P47900 373 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 HOXA1P49639 335 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-213ENST00000519848 AKR1C2P52895 323 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 RELQ04864 619 aaPredicted RBP6.24□□□□□ -1.41
PABPC1-213ENST00000519848 SCGB2B2Q4G0G5 96 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 GDF5OSQ5U4N7 250 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 STEAP1BQ6NZ63 245 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 ARRDC1Q8N5I2 433 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 SLC35G3Q8N808 338 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 TMEM229BQ8NBD8 167 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 DYNC2LI1Q8TCX1 351 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 SMIM4Q8WVI0 70 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 BORCS5Q969J3 196 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 TMEM222Q9H0R3 208 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 CSTL1Q9H114 145 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 FKBP11Q9NYL4 201 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 APLNQ9ULZ1 77 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 FAT2Q9NYQ8 4349 aa6.24□□□□□ -1.41
PABPC1-213ENST00000519848 CRYM-AS1A6NIL9 109 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 MPTX1A8MV57 137 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 CDS2O95674 445 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 ZNF182P17025 639 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-213ENST00000519848 RORCP51449 518 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 RND2P52198 227 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 TRIM16LQ309B1 348 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 LAMTOR1Q6IAA8 161 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 STXBP6Q8NFX7 210 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 OR4X1Q8NH49 305 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 TERB2Q8NHR7 220 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 ZNF486Q96H40 463 aaPredicted RBP6.23□□□□□ -1.41
PABPC1-213ENST00000519848 RARRES2Q99969 163 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 NAA60Q9H7X0 242 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 FBXL17Q9UF56 701 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 GPR132Q9UNW8 380 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 DNAH2Q9P225 4427 aa6.23□□□□□ -1.41
PABPC1-213ENST00000519848 GABARAPH6UMI1 98 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 IFNA17P01571 189 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 PRB4P10163 310 aaPredicted RBP6.22□□□□□ -1.41
PABPC1-213ENST00000519848 OPRK1P41145 380 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 TMEM187Q14656 261 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 NMSQ5H8A3 153 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 TMEM268Q5VZI3 342 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 LPCAT3Q6P1A2 487 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 C16orf54Q6UWD8 224 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 Q6ZTC4 211 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 OR51S1Q8NGJ8 323 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 TRIM63Q969Q1 353 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 SOSTQ9BQB4 213 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 WDR12Q9GZL7 423 aaKnown RBP6.22□□□□□ -1.41
PABPC1-213ENST00000519848 SLIRPQ9GZT3 109 aaKnown RBP6.22□□□□□ -1.41
PABPC1-213ENST00000519848 RABAC1Q9UI14 185 aa6.22□□□□□ -1.41
PABPC1-213ENST00000519848 DYNC1H1Q14204 4646 aaKnown RBP6.21□□□□□ -1.41
PABPC1-213ENST00000519848 IGKV1OR2-108A0A075B7D4 117 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 TEX13DA0A0J9YY54 714 aaPredicted RBP6.21□□□□□ -1.42
PABPC1-213ENST00000519848 ZNF705EA8MWA4 302 aaPredicted RBP6.21□□□□□ -1.42
PABPC1-213ENST00000519848 SOCS3O14543 225 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 RPL5P46777 297 aaKnown RBP6.21□□□□□ -1.42
PABPC1-213ENST00000519848 TAS2R19P59542 299 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 ERHP84090 104 aaKnown RBP6.21□□□□□ -1.42
PABPC1-213ENST00000519848 DHODHQ02127 395 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 ACTL10Q5JWF8 245 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 LGALS9CQ6DKI2 356 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 LYZL2Q7Z4W2 148 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 DUSP18Q8NEJ0 188 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 SLC24A4Q8NFF2 622 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 C11orf45Q8TAV5 145 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 GATAD1Q8WUU5 269 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 NPIPB3Q92617 1050 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 COPZ2Q9P299 210 aa6.21□□□□□ -1.42
PABPC1-213ENST00000519848 TRAV2A0A0B4J234 112 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 A0A1B0GVY2 172 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 SMIM31A0A1B0GVY4 71 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 ANKRD20A5PA0PJZ0 165 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 FAM90A26D6RGX4 464 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 PRSS46E5RG02 174 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 CYB5BO43169 146 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 TBPP20226 339 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 HLA-DMBP28068 263 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 OR10J1P30954 320 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 SNCAP37840 140 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 NPBWR1P48145 328 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 SPCS3P61009 180 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 ZNF90Q03938 601 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 ZNF79Q15937 498 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 C2orf83Q53S99 150 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 PSMG4Q5JS54 123 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 TMEM182Q6ZP80 229 aaPredicted RBP6.2□□□□□ -1.42
PABPC1-213ENST00000519848 RBPMSQ93062 196 aaKnown RBP6.2□□□□□ -1.42
PABPC1-213ENST00000519848 RAB40CQ96S21 281 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 GINS3Q9BRX5 216 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 RBKSQ9H477 322 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 VCX3AQ9NNX9 186 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 TMEM56-RWDD3S4R434 201 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 V9GYH0 126 aa6.2□□□□□ -1.42
PABPC1-213ENST00000519848 F6UB75 175 aa6.19□□□□□ -1.42
PABPC1-213ENST00000519848 H3BMQ9 156 aa6.19□□□□□ -1.42
PABPC1-213ENST00000519848 RGS5O15539 181 aa6.19□□□□□ -1.42
PABPC1-213ENST00000519848 BUB3O43684 328 aa6.19□□□□□ -1.42
PABPC1-213ENST00000519848 PITX3O75364 302 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms