RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 FXYD4P59646 89 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 TMEM258P61165 79 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 RPS18P62269 152 aaKnown RBP3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 GNG5P63218 68 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 HBBP68871 147 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 TRIP6Q15654 476 aaKnown RBP3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 VWC2Q2TAL6 325 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 C3orf36Q3SXR2 165 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 DUX4L9Q6RFH8 374 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 SEM1Q6ZVN7 128 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 TBC1D26Q86UD7 250 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 PDPNQ86YL7 162 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 SBSPONQ8IVN8 264 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 RPRMLQ8N4K4 120 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 LINC01465Q8N7H1 131 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 OR2A1Q8NGT9 310 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 NTN5Q8WTR8 489 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 CNRIP1Q96F85 164 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 LIME1Q9H400 295 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 SLC25A22Q9H936 323 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 STARD5Q9NSY2 213 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 SCN3AQ9NY46 2000 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 HILPDAQ9Y5L2 63 aa3.91□□□□□ -1.78
HMGB1P19-201ENST00000517578 COL4A3Q01955 1670 aa3.9□□□□□ -1.78
HMGB1P19-201ENST00000517578 TRPM6Q9BX84 2022 aa3.9□□□□□ -1.78
HMGB1P19-201ENST00000517578 DOCK11Q5JSL3 2073 aa3.9□□□□□ -1.78
HMGB1P19-201ENST00000517578 A0A087WV48 116 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 A0A0A6YYD4 124 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 A0A0D9SEW6 157 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 UBE2L5PA0A1B0GUS4 154 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM240AA0A1B0GVK7 77 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 TINCRA0A1B0GVN0 87 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 TCRBV4S1A1TA0A5B7 111 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM90A10PA6NDY2 464 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM90A20PA6NIJ5 464 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM90A7PA6NKC0 464 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM90A22PA8MWA6 464 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 A8MWL6 223 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM90A12PA8MX19 464 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM90A5PA8MXJ8 464 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM90A23PA8MXZ1 464 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 DPM2O94777 84 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 NDUFC2O95298 119 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRACP01848 142 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM90A15PP0C7V4 464 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM90A13PP0C7W8 464 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM90A14PP0C7W9 464 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FAM90A24PP0C7X0 464 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 CECR9P0C854 216 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 IGLC6P0CF74 106 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 CYBAP13498 195 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 BCL3P20749 454 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 MFAP2P55001 183 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 DIAPH2-AS1Q14236 149 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 IL11RAQ14626 422 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 C12orf74Q32Q52 190 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 BEAN1Q3B7T3 259 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 TMEM196Q5HYL7 178 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 KLF17Q5JT82 389 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 HES3Q5TGS1 186 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 GAGE2AQ6NT46 116 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 TMEM14EPQ6UXP3 125 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 Q71RC1 249 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 RNF44Q7L0R7 432 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 PPP1R32Q7Z5V6 425 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 HMGN2P46Q86SG4 172 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 PRIMA1Q86XR5 153 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 ODF3L1Q8IXM7 274 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 KIR3DL3Q8N743 410 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 DCAF4L2Q8NA75 395 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 C15orf53Q8NAA6 179 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZNF114Q8NC26 417 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZNF740Q8NDX6 193 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 PHLDA1Q8WV24 401 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZNF501Q96CX3 271 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 SPATA33Q96N06 139 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 LINC01587Q99440 93 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 MGST2Q99735 147 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 PBOV1Q9GZY1 135 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 GFRA4Q9GZZ7 299 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 NHP2Q9NX24 153 aaKnown RBP3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 DLL3Q9NYJ7 618 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 IDI2-AS1Q9NZ38 188 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 RNF181Q9P0P0 153 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 SLC25A10Q9UBX3 287 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 C19orf25Q9UFG5 118 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 LAMTOR3Q9UHA4 124 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 FZR1Q9UM11 496 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 CHCHD2Q9Y6H1 151 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 THSD7AQ9UPZ6 1657 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 TMEM131Q92545 1883 aa3.9□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRIP12Q14669 1992 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRAV2A0A0B4J234 112 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRAV8-2A0A0B4J237 113 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRAV8-4A0A0B4J246 113 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 CCL15-CCL14A0A0B4J2E2 113 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 TRBV7-7A0A0K0K1E9 115 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 ZNF840PA6NDX5 716 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 NPIPB13A6NJU9 1138 aa3.89□□□□□ -1.79
HMGB1P19-201ENST00000517578 NPIPB4C9JG80 1138 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms