RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 C5orf58C9J3I9 102 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 C9JAW5 83 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 TMEM256-PLSCR3K7ERE1 68 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 TXNDC9O14530 226 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 IGHV3-53P01767 116 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 IGHV3-7P01780 117 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 DBIP07108 87 aaKnown RBP3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 S100A1P23297 94 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 FXYD7P58549 80 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 DNAJB13P59910 316 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 SPANXN3Q5MJ09 141 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 ZNF705AQ6ZN79 300 aaPredicted RBP3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 CROCCP2Q86T23 111 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 APCDD1LQ8NCL9 501 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 OR5A1Q8NGJ0 315 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 SMCR5Q8TEV8 140 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 ISOC1Q96CN7 298 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 HIGD1AQ9Y241 93 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 RNF11Q9Y3C5 154 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 S4R3C0 116 aa3.44□□□□□ -1.86
CTNNA1-202ENST00000517533 CABIN1Q9Y6J0 2220 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 FANCAO15360 1455 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 CCDC141Q6ZP82 1450 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 XIRP1Q702N8 1843 aaKnown RBP3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 C1QAP02745 245 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 HIST1H1AQ02539 215 aaPredicted RBP3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 MSMO1Q15800 293 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 MORN2Q502X0 79 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 KPRPQ5T749 579 aaPredicted RBP3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 C1orf140Q5VVS0 124 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 Q5XG85 94 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 OR8I2Q8N0Y5 310 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 C1orf64Q8NEQ6 169 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 OR8D4Q8NGM9 314 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 CANT1Q8WVQ1 401 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 YIPF3Q9GZM5 350 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 VCXQ9H320 206 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 U3KQ87 197 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 RIMBP3CA6NJZ7 1639 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 RIMBP3BA6NNM3 1639 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 RIMBP3Q9UFD9 1639 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 OVOS2A0A0G2JMS6 1433 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 SCAPERQ9BY12 1400 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 ANKRD50Q9ULJ7 1429 aa3.43□□□□□ -1.86
CTNNA1-202ENST00000517533 ARHGEF5Q12774 1597 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 ADGRL2O95490 1459 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 MBD5Q9P267 1494 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 SHANK2Q9UPX8 1470 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 CDC42BPAQ5VT25 1732 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 MYO5CQ9NQX4 1742 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 PREX2Q70Z35 1606 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 ABCA9Q8IUA7 1624 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 IGHV3OR16-8A0A075B7F1 116 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 C7orf66A4D0T2 115 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 GRIFINA4D1Z8 144 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 SULT1C4O75897 302 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 NPYP01303 97 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 CXCL1P09341 107 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 RNASE4P34096 147 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 FOXA1P55317 472 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 PLCXD2Q0VAA5 305 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 EIF3IQ13347 325 aaKnown RBP3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 MIAQ16674 131 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 ZNF660Q6AZW8 331 aaPredicted RBP3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 NOXRED1Q6NXP6 359 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 TSTD1Q8NFU3 115 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 OR10P1Q8NGE3 313 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 MAPKBP1O60336 1514 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 RTEL1-TNFRSF6BF6WH68 1400 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 TTC37Q6PGP7 1564 aa3.42□□□□□ -1.86
CTNNA1-202ENST00000517533 ADGRL1O94910 1474 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 IGHV3-15A0A0B4J1V0 119 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 ARRDC5A6NEK1 342 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 TMEM212A6NML5 194 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 H3BT86 120 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 J3QQQ9 107 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 ZNF22P17026 224 aaPredicted RBP3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 XCL1P47992 114 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 HIST1H4AP62805 103 aaKnown RBP3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 RHOGP84095 191 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 AKR1C1Q04828 323 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 LGALSLQ3ZCW2 172 aaPredicted RBP3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 ZNF880Q6PDB4 577 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 Q8NAQ8 132 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 OR2T10Q8NGZ9 312 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 PPTC7Q8NI37 304 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 MIEN1Q9BRT3 115 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 SMIM3Q9BZL3 60 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 NAT8BQ9UHF3 227 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 HEY1Q9Y5J3 304 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 SAMD9LQ8IVG5 1584 aa3.41□□□□□ -1.86
CTNNA1-202ENST00000517533 MED23Q9ULK4 1368 aa3.4□□□□□ -1.86
CTNNA1-202ENST00000517533 SYCP2Q9BX26 1530 aa3.4□□□□□ -1.86
CTNNA1-202ENST00000517533 A0A087X0T9 212 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 A0A1W2PQD3 144 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 UBFD1O14562 309 aaKnown RBP3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 CDS2O95674 445 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 OR2H2O95918 312 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 APOC1P02654 83 aa3.4□□□□□ -1.87
CTNNA1-202ENST00000517533 SCTP09683 121 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms