RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 TFPI2P48307 235 aa10.48□□□□□ -0.73
PDGFRB-202ENST00000517488 NPIPB3Q92617 1050 aa10.48□□□□□ -0.73
PDGFRB-202ENST00000517488 FAM110AQ9BQ89 295 aa10.48□□□□□ -0.73
PDGFRB-202ENST00000517488 EDA2RQ9HAV5 297 aa10.48□□□□□ -0.73
PDGFRB-202ENST00000517488 TRAV30A0A087WSZ9 112 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 C9orf170A2RU37 121 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 DFFBO76075 338 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 SLC25A6P12236 298 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 OR10J1P30954 320 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 UBE2MP61081 183 aaKnown RBP10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 GGNBP1Q5YKI7 109 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 TCF24Q7RTU0 167 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 NOXA1Q86UR1 476 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 GBGT1Q8N5D6 347 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 OR1S2Q8NGQ3 325 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 MUC7Q8TAX7 377 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 ACY3Q96HD9 319 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 GGTLC1Q9BX51 225 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 TMED3Q9Y3Q3 217 aa10.47□□□□□ -0.73
PDGFRB-202ENST00000517488 LOC102724200A0A096LPH7 203 aaPredicted RBP10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 CENPXA8MT69 81 aa10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 C3orf84H3BNL1 204 aa10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 PLA2G10O15496 165 aa10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 SCGB2A1O75556 95 aa10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 IFNA4P05014 189 aa10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 IAPPP10997 89 aa10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 ANXA7P20073 488 aaKnown RBP10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 NPPCP23582 126 aa10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 ETFRF1Q6IPR1 90 aa10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 METTL26Q96S19 204 aa10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 C7orf50Q9BRJ6 194 aaKnown RBP10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 MAGT1Q9H0U3 335 aa10.46□□□□□ -0.73
PDGFRB-202ENST00000517488 ADAP1O75689 374 aa10.45□□□□□ -0.74
PDGFRB-202ENST00000517488 CRYBB3P26998 211 aa10.45□□□□□ -0.74
PDGFRB-202ENST00000517488 BMI1P35226 326 aa10.45□□□□□ -0.74
PDGFRB-202ENST00000517488 YPEL3P61236 119 aaPredicted RBP10.45□□□□□ -0.74
PDGFRB-202ENST00000517488 DHRS2Q13268 280 aa10.45□□□□□ -0.74
PDGFRB-202ENST00000517488 ZNF124Q15973 351 aa10.45□□□□□ -0.74
PDGFRB-202ENST00000517488 WFDC3Q8IUB2 231 aa10.45□□□□□ -0.74
PDGFRB-202ENST00000517488 APRG1Q8IVJ8 170 aa10.45□□□□□ -0.74
PDGFRB-202ENST00000517488 MPTX1A8MV57 137 aa10.44□□□□□ -0.74
PDGFRB-202ENST00000517488 FAM90A26D6RGX4 464 aa10.44□□□□□ -0.74
PDGFRB-202ENST00000517488 OR4E1P0C645 316 aa10.44□□□□□ -0.74
PDGFRB-202ENST00000517488 ATP5IP56385 69 aaPredicted RBP10.44□□□□□ -0.74
PDGFRB-202ENST00000517488 LYG2Q86SG7 212 aa10.44□□□□□ -0.74
PDGFRB-202ENST00000517488 Q8WTZ3 238 aa10.44□□□□□ -0.74
PDGFRB-202ENST00000517488 MS4A6AQ9H2W1 248 aa10.44□□□□□ -0.74
PDGFRB-202ENST00000517488 RYR2Q92736 4967 aa10.44□□□□□ -0.74
PDGFRB-202ENST00000517488 A0A1W2PS18 150 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 SYNGR2O43760 224 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 MED6O75586 246 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 CD5P06127 495 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 LYL1P12980 280 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 RPL35AP18077 110 aaKnown RBP10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 GPX4P36969 197 aaPredicted RBP10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 P2RY1P47900 373 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 RPL11P62913 178 aaKnown RBP10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 PAFAH1B2P68402 229 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 GAMTQ14353 236 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 USF2Q15853 346 aaPredicted RBP10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 C4orf46Q504U0 113 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 CASC10Q5T4H9 136 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 COQ8AQ8NI60 647 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 OVOL2Q9BRP0 275 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 TMEM231Q9H6L2 316 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 PAIP2BQ9ULR5 123 aaKnown RBP10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 U3KQE9 123 aa10.43□□□□□ -0.74
PDGFRB-202ENST00000517488 CSMD3Q7Z407 3707 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 IGKV1D-37A0A075B6S9 117 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 DNASE2O00115 360 aaPredicted RBP10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 WRBO00258 174 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 LYRM1O43325 122 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 TOMM40O96008 361 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 IL4P05112 153 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 RD3LP0DJH9 198 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 PSG1P11464 419 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 CNPY1Q3B7I2 92 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 ZFAND6Q6FIF0 208 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 FAM24BQ8N5W8 94 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 MAP6D1Q9H9H5 199 aa10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 PLECQ15149 4684 aaKnown RBP10.42□□□□□ -0.74
PDGFRB-202ENST00000517488 A6NHS1 94 aa10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 HNRNPCP07910 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 APOC4P55056 127 aa10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 CMC4P56277 68 aaPredicted RBP10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 RAB11AP62491 216 aa10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 ID3Q02535 119 aa10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 ZNF90Q03938 601 aa10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 OR51G1Q8NGK1 321 aa10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 NARS2Q96I59 477 aaKnown RBP10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 SLC35E1Q96K37 410 aa10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 CIB3Q96Q77 187 aaPredicted RBP10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 C20orf85Q9H1P6 137 aa10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 RABAC1Q9UI14 185 aa10.41□□□□□ -0.74
PDGFRB-202ENST00000517488 TRAV2A0A0B4J234 112 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 ZFP92A6NM28 416 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 H3BP45 60 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 IFNA21P01568 189 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 DEFB131AP59861 70 aa10.4□□□□□ -0.74
PDGFRB-202ENST00000517488 POLR2GP62487 172 aaKnown RBP eCLIP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms