RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 TMEM30BQ3MIR4 351 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 OCC1Q8TAD7 63 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 PIMREGQ9BSJ6 248 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 FOXA2Q9Y261 457 aaPredicted RBP8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 TMEM131Q92545 1883 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 DMRTA1Q5VZB9 504 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 Q6ZSR3 168 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 SPACA3Q8IXA5 215 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 ATOH7Q8N100 152 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 MYOZ3Q8TDC0 251 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 LINC00312Q9Y6C7 94 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 PCDH15Q96QU1 1955 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 SNHG12Q9BXW3 62 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 PARD6GQ9BYG4 376 aaPredicted RBP8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 TBL2Q9Y4P3 447 aaKnown RBP8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 PTPN13Q12923 2485 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 MUC21A0A0G2JKD1 596 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 MUC21A0A140T8X8 626 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 TMEM8BA6NDV4 472 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 SAA1P0DJI8 122 aaPredicted RBP8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 NPPCP23582 126 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 NMUP48645 174 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 MUC21Q5SSG8 566 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 MBNL2Q5VZF2 373 aaKnown RBP8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 DMRTC2Q8IXT2 367 aaPredicted RBP8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 WDR83OSQ9Y284 106 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 MALRD1Q5VYJ5 2156 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 WDFY4Q6ZS81 3184 aa8.97□□□□□ -0.97
PCDHGA1-202ENST00000517417 FOXH1O75593 365 aa8.96□□□□□ -0.97
PCDHGA1-202ENST00000517417 SRSF9Q13242 221 aaKnown RBP eCLIP8.96□□□□□ -0.97
PCDHGA1-202ENST00000517417 C2orf83Q53S99 150 aa8.96□□□□□ -0.97
PCDHGA1-202ENST00000517417 EBLN2Q6P2I7 272 aa8.96□□□□□ -0.97
PCDHGA1-202ENST00000517417 C19orf24Q9BVV8 132 aa8.96□□□□□ -0.97
PCDHGA1-202ENST00000517417 C11orf1Q9H5F2 150 aa8.96□□□□□ -0.97
PCDHGA1-202ENST00000517417 CFAP54Q96N23 3096 aa8.96□□□□□ -0.97
PCDHGA1-202ENST00000517417 TRAV30A0A087WSZ9 112 aa8.96□□□□□ -0.97
PCDHGA1-202ENST00000517417 A0A1W2PS18 150 aa8.96□□□□□ -0.97
PCDHGA1-202ENST00000517417 MIR17HGQ75NE6 70 aa8.96□□□□□ -0.97
PCDHGA1-202ENST00000517417 POLR3KQ9Y2Y1 108 aaPredicted RBP8.96□□□□□ -0.97
PCDHGA1-202ENST00000517417 TRBV9A0A0B4J1U6 114 aa8.96□□□□□ -0.98
PCDHGA1-202ENST00000517417 PDLIM4P50479 330 aa8.96□□□□□ -0.98
PCDHGA1-202ENST00000517417 RELQ04864 619 aaPredicted RBP8.96□□□□□ -0.98
PCDHGA1-202ENST00000517417 Q6P435 159 aa8.96□□□□□ -0.98
PCDHGA1-202ENST00000517417 COLCA1Q6ZS62 124 aa8.96□□□□□ -0.98
PCDHGA1-202ENST00000517417 YPEL4Q96NS1 127 aa8.96□□□□□ -0.98
PCDHGA1-202ENST00000517417 ATP5G2Q06055 141 aa8.96□□□□□ -0.98
PCDHGA1-202ENST00000517417 MEF2CQ06413 473 aaPredicted RBP8.96□□□□□ -0.98
PCDHGA1-202ENST00000517417 FOXL1Q12952 345 aa8.96□□□□□ -0.98
PCDHGA1-202ENST00000517417 DOCK11Q5JSL3 2073 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 YPEL1O60688 119 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 LEPROTL1O95214 131 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 YPEL2Q96QA6 119 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 CCL19Q99731 98 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 WNT10AQ9GZT5 417 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 OR9G9P0C7N8 305 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 TIMP3P35625 211 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 DMDP11532 3685 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 IGHV1-46P01743 117 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 PRB4P10163 310 aaPredicted RBP8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 TDGF1P3P51864 188 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 FAM106AQ4KMX7 169 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 ZNF502Q8TBZ5 544 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 KLK15Q9H2R5 256 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 OR4C46A6NHA9 309 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 TNFSF13O75888 250 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 TRGV3P03979 118 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 GPR183P32249 361 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 RPL24P83731 157 aaKnown RBP8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 FBXL7Q9UJT9 491 aa8.95□□□□□ -0.98
PCDHGA1-202ENST00000517417 DUTP33316 252 aaKnown RBP8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 CA7P43166 264 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 ATP5IP56385 69 aaPredicted RBP8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 LINC00205P59089 165 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 CX3CL1P78423 397 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 FAM90A1Q86YD7 464 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 RNASE6Q93091 150 aaKnown RBP8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 MRPL32Q9BYC8 188 aaKnown RBP8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 PHLDA3Q9Y5J5 127 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 TRAV9-1A0A075B6T8 112 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 LEMD1Q68G75 181 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 AP5S1Q9NUS5 200 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 METRNQ9UJH8 293 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 RBFOX2O43251 390 aaKnown RBP eCLIP8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 DLEU1O43261 78 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 GPX1P07203 203 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 Q6ZPA2 131 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 OR52E5Q8NH55 327 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 PLSCR4Q9NRQ2 329 aa8.94□□□□□ -0.98
PCDHGA1-202ENST00000517417 DPRXA6NFQ7 191 aa8.93□□□□□ -0.98
PCDHGA1-202ENST00000517417 TREML4Q6UXN2 200 aa8.93□□□□□ -0.98
PCDHGA1-202ENST00000517417 CENPVQ7Z7K6 275 aaPredicted RBP8.93□□□□□ -0.98
PCDHGA1-202ENST00000517417 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
PCDHGA1-202ENST00000517417 C7orf69Q9H7B7 122 aa8.93□□□□□ -0.98
PCDHGA1-202ENST00000517417 NRN1Q9NPD7 142 aa8.93□□□□□ -0.98
PCDHGA1-202ENST00000517417 C21orf62Q9NYP8 219 aa8.93□□□□□ -0.98
PCDHGA1-202ENST00000517417 DKK1O94907 266 aa8.93□□□□□ -0.98
PCDHGA1-202ENST00000517417 Q5PR19 223 aa8.93□□□□□ -0.98
PCDHGA1-202ENST00000517417 C10orf55Q5SWW7 151 aa8.93□□□□□ -0.98
PCDHGA1-202ENST00000517417 ODF3L1Q8IXM7 274 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms