RNA–Protein interactions for RNA: ENST00000517251.1

SCARNA20.6-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 106 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.6-201ENST00000517251 PRRC2AP48634 2157 aaKnown RBP2.59□□□□□ -2
SCARNA20.6-201ENST00000517251 TRBV9A0A0B4J1U6 114 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 IGHV3-72A0A0B4J1Y9 119 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 TRAV5A0A0B4J249 113 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 IGHV1-3A0A0C4DH29 117 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 IGHV1-69-2A0A0G2JMI3 117 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 A0A1W2PN81 502 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 GRIFINA4D1Z8 144 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 C19orf71A6NCJ1 209 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 H3BRN7 92 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 I3L2K1 104 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 K7EIM0 57 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 BMPR1BO00238 502 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 PEX7O00628 323 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 ISLRO14498 428 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 PRRG2O14669 202 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 GATCO43716 136 aaKnown RBP2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 SERF1AO75920 110 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 OR2J3O76001 311 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 ACTL6BO94805 426 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 IGKV1-17P01599 117 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 IGLV2-11P01706 119 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 APOHP02749 345 aaPredicted RBP2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 REG1AP05451 166 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 S100A9P06702 114 aaKnown RBP2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 FAM87AP0C7U9 286 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 IGLC1P0CG04 106 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 C8orf88P0DMB2 117 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 HNF1AP20823 631 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 CRYBB3P26998 211 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 S100A2P29034 98 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 DDTP30046 118 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 CDKN1AP38936 164 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 CTRLP40313 264 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 PKIAP61925 76 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 GNG5P63218 68 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 CX3CL1P78423 397 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 PRB3Q04118 309 aaPredicted RBP2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 OR5I1Q13606 314 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 KLK9Q2XQG4 91 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 ZNF672Q499Z4 452 aaPredicted RBP2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 CST9LP1Q5W188 147 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 ALKBH2Q6NS38 261 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 TEX43Q6ZNM6 134 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 REC114Q7Z4M0 266 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 DTX2Q86UW9 622 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 NIT1Q86X76 327 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 MMD2Q8IY49 270 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 ZNF664Q8N3J9 261 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 LINC00469Q8N7U9 141 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 GATD1Q8NB37 220 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 OR5AU1Q8NGC0 362 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 OR4C13Q8NGP0 309 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 OR2T6Q8NHC8 308 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 WIPF2Q8TF74 440 aaPredicted RBP2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 IGFBPL1Q8WX77 278 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 CACNG8Q8WXS5 425 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 TNFRSF14Q92956 283 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 TMEM186Q96B77 213 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 URB1-AS1Q96HZ7 61 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 AJUBAQ96IF1 538 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 C17orf77Q96MU5 243 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 UHRF2Q96PU4 802 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 OR5B12Q96R08 314 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 TRGV9Q99603 122 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 VKORC1Q9BQB6 163 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 NDUFAF3Q9BU61 184 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 C19orf24Q9BVV8 132 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 SCNM1Q9BWG6 230 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 COMMD5Q9GZQ3 224 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 RNASE7Q9H1E1 156 aaKnown RBP2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 FKBP11Q9NYL4 201 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 TECRQ9NZ01 308 aaKnown RBP2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 SH3BGRL2Q9UJC5 107 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 KLK9Q9UKQ9 250 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 SIGLEC9Q9Y336 463 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 KLF12Q9Y4X4 402 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 F11RQ9Y624 299 aaKnown RBP2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 MUC4Q99102 2169 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 NBPF19A0A087WUL8 3843 aa2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 SPTAN1Q13813 2472 aaKnown RBP2.58□□□□□ -2
SCARNA20.6-201ENST00000517251 MXRA5Q9NR99 2828 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 TRBV6-1A0A0K0K1D8 114 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 A0A1W2PPV4 95 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 A6NNC1 897 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 FAM90A27PA6NNH2 459 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 A8MWP6 167 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 B9A039 149 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 LYNX1G3V0Z9 82 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 BUB1B-PAK6H3BSN5 160 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 CORTO00230 105 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 NDUFB3O43676 98 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 OR7C2O60412 319 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 CA1P00915 261 aaPredicted RBP2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 LTAP01374 205 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 IGHV3-48P01763 117 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 MT-ND6P03923 174 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 AMY1AP04745 511 aa2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 SNRPCP09234 159 aaKnown RBP2.57□□□□□ -2
SCARNA20.6-201ENST00000517251 IGLC2P0DOY2 106 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms