RNA–Protein interactions for RNA: ENST00000517164.1

RNU6-1028P-201, Transcript of RNA, U6 small nuclear 1028, pseudogene, humanhuman

BASIC

Gene RNU6-1028P, Length 93 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1028P-201ENST00000517164 OR4E1P0C645 316 aa0.88□□□□□ -2.27
RNU6-1028P-201ENST00000517164 CASP1P29466 404 aa0.88□□□□□ -2.27
RNU6-1028P-201ENST00000517164 LSM6P62312 80 aaKnown RBP0.88□□□□□ -2.27
RNU6-1028P-201ENST00000517164 IAH1Q2TAA2 248 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1028P-201ENST00000517164 C12orf74Q32Q52 190 aa0.88□□□□□ -2.27
RNU6-1028P-201ENST00000517164 GDPD1Q8N9F7 314 aa0.88□□□□□ -2.27
RNU6-1028P-201ENST00000517164 OR10J5Q8NHC4 309 aa0.88□□□□□ -2.27
RNU6-1028P-201ENST00000517164 CT55Q8WUE5 264 aa0.88□□□□□ -2.27
RNU6-1028P-201ENST00000517164 CMSS1Q9BQ75 279 aaKnown RBP0.88□□□□□ -2.27
RNU6-1028P-201ENST00000517164 RNASE7Q9H1E1 156 aaKnown RBP0.88□□□□□ -2.27
RNU6-1028P-201ENST00000517164 SCN10AQ9Y5Y9 1956 aa0.88□□□□□ -2.27
RNU6-1028P-201ENST00000517164 DENND4CQ5VZ89 1909 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 EML5Q05BV3 1969 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 SMIM9A6NGZ8 99 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 M0R2N4 97 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 ZNF682O95780 498 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 CEBPGP53567 150 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 YPEL3P61236 119 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 DEFB113Q30KQ7 82 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 WFDC5Q8TCV5 224 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 OR51V1Q9H2C8 321 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 HS3ST2Q9Y278 367 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 SLC35A3Q9Y2D2 325 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 PRELID3BQ9Y3B1 194 aa0.87□□□□□ -2.27
RNU6-1028P-201ENST00000517164 SBF1O95248 1867 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 hCG_1818297A0A087WSY0 165 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 A8MT66 165 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 PROSCO94903 275 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 TCRBP04435 133 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 C1orf137Q5JT78 98 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 OR6V1Q8N148 313 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 UQCC1Q9NVA1 299 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 NHP2Q9NX24 153 aaKnown RBP0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 EPDR1Q9UM22 224 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 V9GYY5 206 aaPredicted RBP0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 ZFYVE9O95405 1425 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 DOCK3Q8IZD9 2030 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 PLB1Q6P1J6 1458 aa0.86□□□□□ -2.27
RNU6-1028P-201ENST00000517164 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 A0A087X0T9 212 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 C1orf196B1AJZ1 125 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 SMIM17P0DL12 118 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 DEFA3P59666 94 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 MYL6P60660 151 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 EDDM3AQ14507 147 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 BRMS1LQ5PSV4 323 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 GDF5OSQ5U4N7 250 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 LCA10Q71F78 164 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 C3orf56Q8N813 242 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 OR8D4Q8NGM9 314 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 SLC25A40Q8TBP6 338 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 ADAT3Q96EY9 351 aaPredicted RBP0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 UBAP1Q9NZ09 502 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 UTP11Q9Y3A2 253 aaKnown RBP0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 MCM3APO60318 1980 aa0.85□□□□□ -2.27
RNU6-1028P-201ENST00000517164 MED1Q15648 1581 aaPredicted RBP0.84□□□□□ -2.27
RNU6-1028P-201ENST00000517164 SERPINE1P05121 402 aa0.84□□□□□ -2.27
RNU6-1028P-201ENST00000517164 PRB4P10163 310 aaPredicted RBP0.84□□□□□ -2.27
RNU6-1028P-201ENST00000517164 PPIBP23284 216 aaKnown RBP0.84□□□□□ -2.27
RNU6-1028P-201ENST00000517164 TEX261Q6UWH6 196 aa0.84□□□□□ -2.27
RNU6-1028P-201ENST00000517164 PPP1R14BQ96C90 147 aa0.84□□□□□ -2.27
RNU6-1028P-201ENST00000517164 C2orf50Q96LR7 162 aa0.84□□□□□ -2.27
RNU6-1028P-201ENST00000517164 TRIM4Q9C037 500 aa0.84□□□□□ -2.27
RNU6-1028P-201ENST00000517164 RASL12Q9NYN1 266 aa0.84□□□□□ -2.27
RNU6-1028P-201ENST00000517164 U3KQ87 197 aa0.84□□□□□ -2.27
RNU6-1028P-201ENST00000517164 LAMA4Q16363 1823 aa0.84□□□□□ -2.28
RNU6-1028P-201ENST00000517164 TAF1LQ8IZX4 1826 aa0.84□□□□□ -2.28
RNU6-1028P-201ENST00000517164 ADGRB2O60241 1585 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 PIK3C2GO75747 1445 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 C7orf71A4D174 169 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 CCDC160A6NGH7 325 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 INE1O15225 51 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 PDE6DO43924 150 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 C8GP07360 202 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 TSNQ15631 228 aaKnown RBP0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 ESRGQ1W209 222 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 Q6Q795 121 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 CLECL1Q8IZS7 167 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 HIST1H2BLQ99880 126 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 CDC42SE1Q9NRR8 79 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 IDI2-AS1Q9NZ38 188 aa0.83□□□□□ -2.28
RNU6-1028P-201ENST00000517164 ZNF736B4DX44 427 aaPredicted RBP0.82□□□□□ -2.28
RNU6-1028P-201ENST00000517164 ZNF25P17030 456 aaPredicted RBP0.82□□□□□ -2.28
RNU6-1028P-201ENST00000517164 CDKN2CP42773 168 aa0.82□□□□□ -2.28
RNU6-1028P-201ENST00000517164 HIST1H3AP68431 136 aa0.82□□□□□ -2.28
RNU6-1028P-201ENST00000517164 H3F3AP84243 136 aa0.82□□□□□ -2.28
RNU6-1028P-201ENST00000517164 SRSF6Q13247 344 aaKnown RBP0.82□□□□□ -2.28
RNU6-1028P-201ENST00000517164 RGS21Q2M5E4 152 aa0.82□□□□□ -2.28
RNU6-1028P-201ENST00000517164 OR51A2Q8NGJ7 313 aa0.82□□□□□ -2.28
RNU6-1028P-201ENST00000517164 TVP23BQ9NYZ1 205 aa0.82□□□□□ -2.28
RNU6-1028P-201ENST00000517164 GLTPQ9NZD2 209 aa0.82□□□□□ -2.28
RNU6-1028P-201ENST00000517164 SNRNP200O75643 2136 aaKnown RBP0.82□□□□□ -2.28
RNU6-1028P-201ENST00000517164 CYB5BO43169 146 aa0.81□□□□□ -2.28
RNU6-1028P-201ENST00000517164 SRIP30626 198 aa0.81□□□□□ -2.28
RNU6-1028P-201ENST00000517164 RHOBP62745 196 aa0.81□□□□□ -2.28
RNU6-1028P-201ENST00000517164 TMEM97Q5BJF2 176 aa0.81□□□□□ -2.28
RNU6-1028P-201ENST00000517164 SOSTDC1Q6X4U4 206 aa0.81□□□□□ -2.28
RNU6-1028P-201ENST00000517164 LINC00301Q8NCQ3 95 aa0.81□□□□□ -2.28
RNU6-1028P-201ENST00000517164 OR52L1Q8NGH7 329 aa0.81□□□□□ -2.28
RNU6-1028P-201ENST00000517164 C6orf62Q9GZU0 229 aaPredicted RBP0.81□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms