RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 TXNL4BQ9NX01 149 aaKnown RBP1.49□□□□□ -2.17
SCARNA3-201ENST00000517097 LAMTOR2Q9Y2Q5 125 aa1.49□□□□□ -2.17
SCARNA3-201ENST00000517097 FAM215AQ9Y5M1 114 aa1.49□□□□□ -2.17
SCARNA3-201ENST00000517097 R4GN34 69 aa1.49□□□□□ -2.17
SCARNA3-201ENST00000517097 MINOS1-NBL1R4GNA1 71 aa1.49□□□□□ -2.17
SCARNA3-201ENST00000517097 MYO9BQ13459 2157 aa1.49□□□□□ -2.17
SCARNA3-201ENST00000517097 MED12LQ86YW9 2145 aa1.49□□□□□ -2.17
SCARNA3-201ENST00000517097 CITO14578 2027 aa1.49□□□□□ -2.17
SCARNA3-201ENST00000517097 BCL9O00512 1426 aa1.49□□□□□ -2.17
SCARNA3-201ENST00000517097 TRPM7Q96QT4 1865 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 TRGV5A0A0B4J1U4 118 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 A0A1B0GX51 115 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 TMEM235A6NFC5 223 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 EFCAB10A6NFE3 127 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 TMEM212A6NML5 194 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 OR2T1O43869 369 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 CPSF4O95639 269 aaKnown RBP1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 BPGMP07738 259 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 BCL2P10415 239 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 ZNF14P17017 642 aaPredicted RBP1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 FKBP2P26885 142 aaKnown RBP1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 S100A11P31949 105 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 SRP14P37108 136 aaKnown RBP1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 RPL28P46779 137 aaKnown RBP1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 KRTAP10-5P60370 271 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 EIF5AP63241 154 aaKnown RBP1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 RTL8BQ17RB0 113 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 BRMS1LQ5PSV4 323 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 BCL2L15Q5TBC7 163 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 KRTAP5-1Q6L8H4 278 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 AGTRAPQ6RW13 159 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 HMGN2P46Q86SG4 172 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 KRTAP11-1Q8IUC1 163 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 PRR15Q8IV56 129 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 MSRB3Q8IXL7 192 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 DYNAPQ8N1N2 210 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 C10orf126Q8N4M7 172 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 OR8J3Q8NGG0 315 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 OR51T1Q8NGJ9 327 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 ISOC1Q96CN7 298 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 SCGB3A1Q96QR1 104 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 TSC22D3Q99576 134 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 OSTCQ9NRP0 149 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 SPANXCQ9NY87 97 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 TRAPPC2LQ9UL33 140 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 MED31Q9Y3C7 131 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 PHLPP1O60346 1717 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 NCAPD3P42695 1498 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 RP1P56715 2156 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 RIMBP3CA6NJZ7 1639 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 RIMBP3BA6NNM3 1639 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 RIMBP3Q9UFD9 1639 aa1.48□□□□□ -2.17
SCARNA3-201ENST00000517097 KIF13AQ9H1H9 1805 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 ATRXP46100 2492 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 CEP192Q8TEP8 1941 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 IGLV2-18A0A075B6J9 118 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 IGKV2-28A0A075B6P5 120 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 BORCS7-ASMTA0A0B4J1R7 106 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 TMEM189A5PLL7 270 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 ARRDC5A6NEK1 342 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 GABARAPH6UMI1 98 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 C19orf84I3L1E1 186 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 TMEM256-PLSCR3K7ERE1 68 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 OVOL1O14753 267 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 SLC22A1O15245 554 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 GNRH2O43555 120 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 PSCAO43653 123 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 NDUFA2O43678 99 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 SYNGR2O43760 224 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 GGCTO75223 188 aaKnown RBP1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 IGKV2D-28P01615 120 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 UCHL1P09936 223 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 RNASE4P34096 147 aaKnown RBP1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 EIF2B2P49770 351 aaKnown RBP1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 KRTAP10-12P60413 245 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 UBE2BP63146 152 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 SUPT4H1P63272 117 aaKnown RBP1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 PLCXD2Q0VAA5 305 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 EIF3IQ13347 325 aaKnown RBP1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 DNLZQ5SXM8 178 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 C1orf140Q5VVS0 124 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 LHFPL1Q86WI0 220 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 SIGLECL1Q8N7X8 197 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 TMEM229BQ8NBD8 167 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 Q8NDZ9 215 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 PFN4Q8NHR9 129 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 PPTC7Q8NI37 304 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 YPEL2Q96QA6 119 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 PFDN5Q99471 154 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 HIST1H2BLQ99880 126 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 SLC25A21Q9BQT8 299 aaPredicted RBP1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 GINS4Q9BRT9 223 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 YIPF3Q9GZM5 350 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 TMEM126AQ9H061 195 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 OTORQ9NRC9 128 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 HSPE1-MOB4S4R3N1 261 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 NINQ8N4C6 2090 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 HEATR5BQ9P2D3 2071 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 TRPM1Q7Z4N2 1603 aa1.47□□□□□ -2.17
SCARNA3-201ENST00000517097 ATG2AQ2TAZ0 1938 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms