RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 SLC35E3Q7Z769 313 aa15.88■□□□□ 0.13
TRIO-223ENST00000515710 STAG3L2P0CL84 134 aa15.87■□□□□ 0.13
TRIO-223ENST00000515710 STAG3L3P0CL85 134 aa15.87■□□□□ 0.13
TRIO-223ENST00000515710 BCL2P10415 239 aa15.87■□□□□ 0.13
TRIO-223ENST00000515710 PSMB3P49720 205 aa15.87■□□□□ 0.13
TRIO-223ENST00000515710 SSTP61278 116 aa15.87■□□□□ 0.13
TRIO-223ENST00000515710 OR4X1Q8NH49 305 aa15.87■□□□□ 0.13
TRIO-223ENST00000515710 RNF2Q99496 336 aa15.87■□□□□ 0.13
TRIO-223ENST00000515710 TUBA4BQ9H853 241 aa15.87■□□□□ 0.13
TRIO-223ENST00000515710 TNFRSF19Q9NS68 423 aa15.87■□□□□ 0.13
TRIO-223ENST00000515710 PITPNC1Q9UKF7 332 aa15.87■□□□□ 0.13
TRIO-223ENST00000515710 SOX21Q9Y651 276 aaPredicted RBP15.87■□□□□ 0.13
TRIO-223ENST00000515710 IGLV11-55A0A075B6I3 123 aa15.86■□□□□ 0.13
TRIO-223ENST00000515710 A6NDX4 124 aa15.86■□□□□ 0.13
TRIO-223ENST00000515710 C1orf196B1AJZ1 125 aa15.86■□□□□ 0.13
TRIO-223ENST00000515710 GATA2P23769 480 aaPredicted RBP15.86■□□□□ 0.13
TRIO-223ENST00000515710 TMEM219Q86XT9 240 aa15.86■□□□□ 0.13
TRIO-223ENST00000515710 MANBALQ9NQG1 85 aa15.86■□□□□ 0.13
TRIO-223ENST00000515710 THYN1Q9P016 225 aa15.86■□□□□ 0.13
TRIO-223ENST00000515710 VAX2Q9UIW0 290 aa15.86■□□□□ 0.13
TRIO-223ENST00000515710 K7EIM0 57 aa15.86■□□□□ 0.13
TRIO-223ENST00000515710 FANCD2OSQ96PS1 177 aa15.86■□□□□ 0.13
TRIO-223ENST00000515710 TACC2O95359 2948 aa15.85■□□□□ 0.13
TRIO-223ENST00000515710 CRYBG3Q68DQ2 2970 aa15.85■□□□□ 0.13
TRIO-223ENST00000515710 IGHV3-21A0A0B4J1V1 117 aa15.85■□□□□ 0.13
TRIO-223ENST00000515710 H3BUX3 64 aa15.85■□□□□ 0.13
TRIO-223ENST00000515710 CXorf1O96002 111 aa15.85■□□□□ 0.13
TRIO-223ENST00000515710 SRP19P09132 144 aaKnown RBP15.85■□□□□ 0.13
TRIO-223ENST00000515710 FAM78BQ5VT40 261 aa15.85■□□□□ 0.13
TRIO-223ENST00000515710 C16orf82Q7Z2V1 217 aa15.85■□□□□ 0.13
TRIO-223ENST00000515710 OR1L4Q8NGR5 311 aa15.85■□□□□ 0.13
TRIO-223ENST00000515710 FAM110DQ8TAY7 271 aaPredicted RBP15.85■□□□□ 0.13
TRIO-223ENST00000515710 GATAD1Q8WUU5 269 aa15.85■□□□□ 0.13
TRIO-223ENST00000515710 TMPRSS5Q9H3S3 457 aa15.85■□□□□ 0.13
TRIO-223ENST00000515710 SEPSECSQ9HD40 501 aaKnown RBP15.85■□□□□ 0.13
TRIO-223ENST00000515710 FUT9Q9Y231 359 aa15.85■□□□□ 0.13
TRIO-223ENST00000515710 M0QZK8 103 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 FSHBP01225 129 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 HIST1H1BP16401 226 aaKnown RBP15.84■□□□□ 0.13
TRIO-223ENST00000515710 ZNF90Q03938 601 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 ATP6V0E1O15342 81 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 NDUFS6O75380 124 aaKnown RBP15.84■□□□□ 0.13
TRIO-223ENST00000515710 OR5G3P0C626 314 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 SNRPEP62304 92 aaKnown RBP15.84■□□□□ 0.13
TRIO-223ENST00000515710 KLK9Q2XQG4 91 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 AKIRIN2Q53H80 203 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 UNQ5815/PRO19632Q6UWF5 114 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 OR5T1Q8NG75 326 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 PFDN5Q99471 154 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 MRPL32Q9BYC8 188 aaKnown RBP15.84■□□□□ 0.13
TRIO-223ENST00000515710 DNAJC4Q9NNZ3 241 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 KLK9Q9UKQ9 250 aa15.84■□□□□ 0.13
TRIO-223ENST00000515710 CLN5O75503 358 aa15.83■□□□□ 0.12
TRIO-223ENST00000515710 TMUB1Q9BVT8 246 aa15.83■□□□□ 0.12
TRIO-223ENST00000515710 NIT2Q9NQR4 276 aa15.83■□□□□ 0.12
TRIO-223ENST00000515710 ANKRD17O75179 2603 aaKnown RBP15.82■□□□□ 0.12
TRIO-223ENST00000515710 PSMB11A5LHX3 300 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 MT-ND4LP03901 98 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 AMY1AP04745 511 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 IGLC1P0CG04 106 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 LY6EQ16553 131 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 SPATA31B1PQ5VZV4 182 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 SPNS3Q6ZMD2 512 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 C9orf139Q6ZV77 190 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 C2CD4CQ8TF44 421 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 FOXC2Q99958 501 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 DOPEY2Q9Y3R5 2298 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 ARL14EPLP0DKL9 152 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 CRIP2P52943 208 aaPredicted RBP15.82■□□□□ 0.12
TRIO-223ENST00000515710 DEFB112Q30KQ8 113 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 WFDC11Q8NEX6 87 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 TMEM37Q8WXS4 190 aa15.82■□□□□ 0.12
TRIO-223ENST00000515710 TECRQ9NZ01 308 aaKnown RBP15.82■□□□□ 0.12
TRIO-223ENST00000515710 TRAV30A0A087WSZ9 112 aa15.81■□□□□ 0.12
TRIO-223ENST00000515710 ELOA3CA0A087WX78 387 aaPredicted RBP15.81■□□□□ 0.12
TRIO-223ENST00000515710 COX7A2P2O60397 106 aa15.81■□□□□ 0.12
TRIO-223ENST00000515710 MFAP4P55083 255 aa15.81■□□□□ 0.12
TRIO-223ENST00000515710 TAS2R45P59539 299 aa15.81■□□□□ 0.12
TRIO-223ENST00000515710 SOHLH1Q5JUK2 328 aa15.81■□□□□ 0.12
TRIO-223ENST00000515710 MIR17HGQ75NE6 70 aa15.81■□□□□ 0.12
TRIO-223ENST00000515710 ZNF48Q96MX3 618 aaPredicted RBP15.81■□□□□ 0.12
TRIO-223ENST00000515710 CR1P17927 2039 aa15.81■□□□□ 0.12
TRIO-223ENST00000515710 NAV3Q8IVL0 2385 aa15.81■□□□□ 0.12
TRIO-223ENST00000515710 ECSCRQ19T08 205 aa15.8■□□□□ 0.12
TRIO-223ENST00000515710 BCL6BQ8N143 479 aaPredicted RBP15.8■□□□□ 0.12
TRIO-223ENST00000515710 HIST1H2BAQ96A08 127 aa15.8■□□□□ 0.12
TRIO-223ENST00000515710 ASH1LQ9NR48 2969 aaKnown RBP15.8■□□□□ 0.12
TRIO-223ENST00000515710 SH2D7A6NKC9 451 aaPredicted RBP15.8■□□□□ 0.12
TRIO-223ENST00000515710 PLP1P60201 277 aa15.8■□□□□ 0.12
TRIO-223ENST00000515710 MEF2BQ02080 365 aaPredicted RBP15.8■□□□□ 0.12
TRIO-223ENST00000515710 C10orf113Q5VZT2 155 aa15.8■□□□□ 0.12
TRIO-223ENST00000515710 TENM4Q6N022 2769 aa15.79■□□□□ 0.12
TRIO-223ENST00000515710 PTPN13Q12923 2485 aa15.79■□□□□ 0.12
TRIO-223ENST00000515710 LINC01548A6NM66 108 aa15.79■□□□□ 0.12
TRIO-223ENST00000515710 PAGE4O60829 102 aa15.79■□□□□ 0.12
TRIO-223ENST00000515710 C8orf88P0DMB2 117 aa15.79■□□□□ 0.12
TRIO-223ENST00000515710 GCHFRP30047 84 aa15.79■□□□□ 0.12
TRIO-223ENST00000515710 PQLC2Q6ZP29 291 aa15.79■□□□□ 0.12
TRIO-223ENST00000515710 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.79■□□□□ 0.122e-6■■□□□ 14.1
TRIO-223ENST00000515710 MDFIC2A0A1B0GVS7 189 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms