RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 RNF222A6NCQ9 220 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 PPP5D1E7EU14 171 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 CCL24O00175 119 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 NUPL2O15504 423 aaKnown RBP16.15■□□□□ 0.18
LSM6-207ENST00000515311 GGCTO75223 188 aaKnown RBP16.15■□□□□ 0.18
LSM6-207ENST00000515311 AKR1C1Q04828 323 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 TMEM144Q7Z5S9 345 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 THAP8Q8NA92 274 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 OR11H1Q8NG94 326 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 DPF1Q92782 380 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 TMEM147Q9BVK8 224 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 NPVFQ9HCQ7 196 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 UQCC1Q9NVA1 299 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 BOLA1Q9Y3E2 137 aa16.15■□□□□ 0.18
LSM6-207ENST00000515311 LINC01619G3V211 115 aa16.14■□□□□ 0.17
LSM6-207ENST00000515311 ARPC5O15511 151 aa16.14■□□□□ 0.17
LSM6-207ENST00000515311 IGLC1P0CG04 106 aa16.14■□□□□ 0.17
LSM6-207ENST00000515311 ZP3P21754 424 aa16.14■□□□□ 0.17
LSM6-207ENST00000515311 OR10J1P30954 320 aa16.14■□□□□ 0.17
LSM6-207ENST00000515311 ADMP35318 185 aa16.14■□□□□ 0.17
LSM6-207ENST00000515311 CD300CQ08708 224 aa16.14■□□□□ 0.17
LSM6-207ENST00000515311 CHRDL1Q9BU40 450 aa16.14■□□□□ 0.17
LSM6-207ENST00000515311 SMCO3A2RU48 225 aa16.13■□□□□ 0.17
LSM6-207ENST00000515311 M0QZ24 198 aa16.13■□□□□ 0.17
LSM6-207ENST00000515311 IGKV1-17P01599 117 aa16.13■□□□□ 0.17
LSM6-207ENST00000515311 MYCNOSP40205 109 aa16.13■□□□□ 0.17
LSM6-207ENST00000515311 ZNF345Q14585 488 aa16.13■□□□□ 0.17
LSM6-207ENST00000515311 IGKV1OR2-108A0A075B7D4 117 aa16.12■□□□□ 0.17
LSM6-207ENST00000515311 DFFBO76075 338 aa16.12■□□□□ 0.17
LSM6-207ENST00000515311 RELQ04864 619 aaPredicted RBP16.12■□□□□ 0.17
LSM6-207ENST00000515311 OR2F1Q13607 317 aa16.12■□□□□ 0.17
LSM6-207ENST00000515311 RPEL1Q2QD12 228 aa16.12■□□□□ 0.17
LSM6-207ENST00000515311 TEPPQ6URK8 271 aa16.12■□□□□ 0.17
LSM6-207ENST00000515311 TREML4Q6UXN2 200 aa16.12■□□□□ 0.17
LSM6-207ENST00000515311 SPATA3Q8NHX4 192 aa16.12■□□□□ 0.17
LSM6-207ENST00000515311 HYLS1Q96M11 299 aa16.12■□□□□ 0.17
LSM6-207ENST00000515311 TRGV9Q99603 122 aa16.12■□□□□ 0.17
LSM6-207ENST00000515311 ATP5SQ99766 215 aa16.12■□□□□ 0.17
LSM6-207ENST00000515311 MFFQ9GZY8 342 aa16.12■□□□□ 0.17
LSM6-207ENST00000515311 LSM4Q9Y4Z0 139 aaKnown RBP16.12■□□□□ 0.17
LSM6-207ENST00000515311 IGKV1D-37A0A075B6S9 117 aa16.11■□□□□ 0.17
LSM6-207ENST00000515311 ZFP92A6NM28 416 aa16.11■□□□□ 0.17
LSM6-207ENST00000515311 HOXD3P31249 432 aaPredicted RBP16.11■□□□□ 0.17
LSM6-207ENST00000515311 YPEL3P61236 119 aaPredicted RBP16.11■□□□□ 0.17
LSM6-207ENST00000515311 CLINT1Q14677 625 aa16.11■□□□□ 0.17
LSM6-207ENST00000515311 ZFP69Q49AA0 526 aa16.11■□□□□ 0.17
LSM6-207ENST00000515311 DUX3Q96PT4 197 aa16.11■□□□□ 0.17
LSM6-207ENST00000515311 FBXL17Q9UF56 701 aa16.11■□□□□ 0.17
LSM6-207ENST00000515311 WDR83OSQ9Y284 106 aa16.11■□□□□ 0.17
LSM6-207ENST00000515311 UBE2L5PA0A1B0GUS4 154 aa16.1■□□□□ 0.17
LSM6-207ENST00000515311 PFDN1O60925 122 aa16.1■□□□□ 0.17
LSM6-207ENST00000515311 OR2C1O95371 312 aa16.1■□□□□ 0.17
LSM6-207ENST00000515311 FABP1P07148 127 aa16.1■□□□□ 0.17
LSM6-207ENST00000515311 TIGITQ495A1 244 aa16.1■□□□□ 0.17
LSM6-207ENST00000515311 GPHB5Q86YW7 130 aa16.1■□□□□ 0.17
LSM6-207ENST00000515311 MPDU1O75352 247 aa16.09■□□□□ 0.17
LSM6-207ENST00000515311 PF4P02776 101 aa16.09■□□□□ 0.17
LSM6-207ENST00000515311 AP2S1P53680 142 aaPredicted RBP16.09■□□□□ 0.17
LSM6-207ENST00000515311 KLF5Q13887 457 aaPredicted RBP16.09■□□□□ 0.17
LSM6-207ENST00000515311 ZNF600Q6ZNG1 722 aa16.09■□□□□ 0.17
LSM6-207ENST00000515311 KCNRGQ8N5I3 272 aa16.09■□□□□ 0.17
LSM6-207ENST00000515311 ZNF414Q96IQ9 312 aa16.09■□□□□ 0.17
LSM6-207ENST00000515311 SMIM3Q9BZL3 60 aa16.09■□□□□ 0.17
LSM6-207ENST00000515311 VWFP04275 2813 aa16.09■□□□□ 0.17
LSM6-207ENST00000515311 A0A0D9SG52 128 aa16.08■□□□□ 0.16
LSM6-207ENST00000515311 NDUFA4O00483 81 aa16.08■□□□□ 0.16
LSM6-207ENST00000515311 TOMM40O96008 361 aa16.08■□□□□ 0.16
LSM6-207ENST00000515311 SLURP1P55000 103 aa16.08■□□□□ 0.16
LSM6-207ENST00000515311 RAB31Q13636 194 aa16.08■□□□□ 0.16
LSM6-207ENST00000515311 FAM106AQ4KMX7 169 aa16.08■□□□□ 0.16
LSM6-207ENST00000515311 C1QL4Q86Z23 238 aa16.08■□□□□ 0.16
LSM6-207ENST00000515311 PARD6GQ9BYG4 376 aaPredicted RBP16.08■□□□□ 0.16
LSM6-207ENST00000515311 ANK2Q01484 3957 aa16.07■□□□□ 0.16
LSM6-207ENST00000515311 LGALS9O00182 355 aa16.07■□□□□ 0.16
LSM6-207ENST00000515311 TAAR5O14804 337 aa16.07■□□□□ 0.16
LSM6-207ENST00000515311 TSPAN15O95858 294 aa16.07■□□□□ 0.16
LSM6-207ENST00000515311 RD3LP0DJH9 198 aa16.07■□□□□ 0.16
LSM6-207ENST00000515311 CXCL2P19875 107 aa16.07■□□□□ 0.16
LSM6-207ENST00000515311 SELENOTP62341 195 aa16.07■□□□□ 0.16
LSM6-207ENST00000515311 ZNF90Q03938 601 aa16.07■□□□□ 0.16
LSM6-207ENST00000515311 ZNF266Q14584 549 aa16.07■□□□□ 0.16
LSM6-207ENST00000515311 BTNL8Q6UX41 500 aa16.07■□□□□ 0.16
LSM6-207ENST00000515311 WFDC1Q9HC57 220 aa16.07■□□□□ 0.16
LSM6-207ENST00000515311 WNK1Q9H4A3 2382 aa16.06■□□□□ 0.16
LSM6-207ENST00000515311 IGHV3-35A0A0C4DH35 117 aa16.06■□□□□ 0.16
LSM6-207ENST00000515311 IFNA5P01569 189 aa16.06■□□□□ 0.16
LSM6-207ENST00000515311 FGF7P21781 194 aa16.06■□□□□ 0.16
LSM6-207ENST00000515311 EIF2B2P49770 351 aaKnown RBP16.06■□□□□ 0.16
LSM6-207ENST00000515311 CYP2G1PQ6ZSU1 146 aa16.06■□□□□ 0.16
LSM6-207ENST00000515311 REC114Q7Z4M0 266 aa16.06■□□□□ 0.16
LSM6-207ENST00000515311 LINC00482Q8N8I6 264 aa16.06■□□□□ 0.16
LSM6-207ENST00000515311 Q8WTZ3 238 aa16.06■□□□□ 0.16
LSM6-207ENST00000515311 TMEM190Q8WZ59 177 aa16.06■□□□□ 0.16
LSM6-207ENST00000515311 MGST2Q99735 147 aa16.06■□□□□ 0.16
LSM6-207ENST00000515311 WDR61Q9GZS3 305 aaKnown RBP16.06■□□□□ 0.16
LSM6-207ENST00000515311 AGPAT2O15120 278 aa16.05■□□□□ 0.16
LSM6-207ENST00000515311 CFDP00746 253 aaPredicted RBP16.05■□□□□ 0.16
LSM6-207ENST00000515311 PSG1P11464 419 aa16.05■□□□□ 0.16
LSM6-207ENST00000515311 SYNJ2BPP57105 145 aa16.05■□□□□ 0.16
LSM6-207ENST00000515311 DLX4Q92988 240 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms