RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 OR8G2PQ6IF36 304 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 PRSS54Q6PEW0 395 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 ACOT7LQ6ZUV0 252 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 RNASEH2CQ8TDP1 164 aaKnown RBP7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 RNF141Q8WVD5 230 aa7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 BSCL2Q96G97 398 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-209ENST00000513818 RPS10-NUDT3A0A1W2PQS6 291 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 IGSF23A1L1A6 192 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 ZNF320A2RRD8 509 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 FAM24AA6NFZ4 105 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 PRSS46E5RG02 174 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 H0YIZ8 118 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 ZNF207O43670 478 aaKnown RBP7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 CTSGP08311 255 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 CAV2P51636 162 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 ARL16Q0P5N6 197 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 KLF5Q13887 457 aaPredicted RBP7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 TIGITQ495A1 244 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 PPP1R1CQ8WVI7 109 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 NPIPB3Q92617 1050 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 SMIM8Q96KF7 97 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 RAB40CQ96S21 281 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 NMES1Q9C002 83 aa7.48□□□□□ -1.21
TOPBP1-209ENST00000513818 SMCO3A2RU48 225 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 PGPEP1LA6NFU8 196 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 PMS2P5A8MQ11 134 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 NUPL2O15504 423 aaKnown RBP7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 TSC22D2O75157 780 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 SAP30O75446 220 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 CLN5O75503 358 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 DEDDO75618 318 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 CST7O76096 145 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 NPBWR1P48145 328 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 TMEM14EPQ6UXP3 125 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 NOXA1Q86UR1 476 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 WFDC9Q8NEX5 89 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 OR9G4Q8NGQ1 327 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 OR4X1Q8NH49 305 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 SLC35E1Q96K37 410 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 C20orf24Q9BUV8 137 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 MBD2Q9UBB5 411 aa7.47□□□□□ -1.21
TOPBP1-209ENST00000513818 IGHV3-49A0A0A0MS15 119 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 TRAV14DV4A0A0A6YYC5 116 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 TMEM213A2RRL7 107 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 YIF1AO95070 293 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 IGKV1-17P01599 117 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 PRB2P02812 416 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 IGLC1P0CG04 106 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 SLC25A4P12235 298 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 PVALBP20472 110 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 OR10J1P30954 320 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 FCGR2BP31994 310 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 TAS2R30P59541 319 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 RPP30P78346 268 aaKnown RBP7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 AKR1C1Q04828 323 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 GAMTQ14353 236 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 IL34Q6ZMJ4 242 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 ADAMTSL5Q6ZMM2 481 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 TMEM217Q8N7C4 229 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 TMEM190Q8WZ59 177 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 TXN2Q99757 166 aa7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 ZNF436Q9C0F3 470 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-209ENST00000513818 NOTCH3Q9UM47 2321 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 IGKV1D-37A0A075B6S9 117 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 IGKV1OR2-108A0A075B7D4 117 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 IGHV3OR16-13A0A075B7E8 117 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 IGHV3-74A0A0B4J1X5 117 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 IGHV3-66A0A0C4DH42 116 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 C2orf70A6NJV1 201 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 ZFP92A6NM28 416 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 SMLR1H3BR10 107 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 MPC2O95563 127 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 CSN3P07498 182 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 ZNF90Q03938 601 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 OR2F1Q13607 317 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 Q5BKY6 102 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 C9orf66Q5T8R8 295 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 ETFRF1Q6IPR1 90 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 SPSB3Q6PJ21 355 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 GPHB5Q86YW7 130 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 TMEM252Q8N6L7 170 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 RNF126Q9BV68 326 aa7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 LYRM2Q9NU23 88 aaPredicted RBP7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 GAR1Q9NY12 217 aaKnown RBP7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 PUS1Q9Y606 427 aaKnown RBP eCLIP7.45□□□□□ -1.22
TOPBP1-209ENST00000513818 NOTCH1P46531 2555 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 DNAH9Q9NYC9 4486 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 UBE2L5PA0A1B0GUS4 154 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 E5RGE8 158 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 NDUFA4O00483 81 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 LY86O95711 162 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 GIPP09681 153 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 GATA2P23769 480 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 GPX4P36969 197 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 ATP5IP56385 69 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 KRTAP10-11P60412 298 aa7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 CYCSP99999 105 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 EWSR1Q01844 656 aaKnown RBP eCLIP7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 RELQ04864 619 aaPredicted RBP7.44□□□□□ -1.22
TOPBP1-209ENST00000513818 SLC38A11Q08AI6 406 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms