RNA–Protein interactions for RNA: ENST00000513769.5

TPM3-221, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-221ENST00000513769 SCGB2A2Q13296 93 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 MLANAQ16655 118 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 C10orf55Q5SWW7 151 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 RUSC1-AS1Q66K80 236 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 OR1L4Q8NGR5 311 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 VN1R17PQ8TDU5 208 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 ABHD5Q8WTS1 349 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 PCNPQ8WW12 178 aaKnown RBP7.79□□□□□ -1.16
TPM3-221ENST00000513769 NPIPB3Q92617 1050 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 FAM210AQ96ND0 272 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 PFDN5Q99471 154 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 GGTLC1Q9BX51 225 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 FNDC4Q9H6D8 234 aaPredicted RBP7.79□□□□□ -1.16
TPM3-221ENST00000513769 DNAJC4Q9NNZ3 241 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 TMEM160Q9NX00 188 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 RNF24Q9Y225 148 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 PXMP4Q9Y6I8 212 aa7.79□□□□□ -1.16
TPM3-221ENST00000513769 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.79□□□□□ -1.16
TPM3-221ENST00000513769 IGLV11-55A0A075B6I3 123 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 ANKRD34BA5PLL1 514 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 H3BUA1 57 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 CLN5O75503 358 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 S100A7P31151 101 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 FHITP49789 147 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 MFAP4P55083 255 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 KHDC3LQ587J8 217 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 SPSB3Q6PJ21 355 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 CYP2G1PQ6ZSU1 146 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 SLC35E3Q7Z769 313 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 TMEM86BQ8N661 226 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 OR2T6Q8NHC8 308 aa7.78□□□□□ -1.16
TPM3-221ENST00000513769 FAM110DQ8TAY7 271 aaPredicted RBP7.78□□□□□ -1.16
TPM3-221ENST00000513769 PRRC2AP48634 2157 aaKnown RBP7.77□□□□□ -1.17
TPM3-221ENST00000513769 ABCA2Q9BZC7 2435 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 IGKV1OR2-108A0A075B7D4 117 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 TRBV9A0A0B4J1U6 114 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 TMEM218A2RU14 115 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 TMEM89A2RUT3 159 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 RBFOX3A6NFN3 312 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 ZFP92A6NM28 416 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 H3BUX3 64 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 CD5LO43866 347 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 IFNA1P01562 189 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 AMY1AP04745 511 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 PAX6P26367 422 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 OR10J1P30954 320 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 MFAP2P55001 183 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 TAS2R45P59539 299 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 YPEL3P61236 119 aaPredicted RBP7.77□□□□□ -1.17
TPM3-221ENST00000513769 GUK1Q16774 197 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 FAM209BQ5JX69 171 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 C10orf91Q5T1B1 145 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 ASPHD1Q5U4P2 390 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 ACSM6Q6P461 480 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 UNQ5815/PRO19632Q6UWF5 114 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 STPG3Q8N7X2 389 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 NECAP1Q8NC96 275 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 WFDC11Q8NEX6 87 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 STXBP6Q8NFX7 210 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 RAB24Q969Q5 203 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 RCC1LQ96I51 464 aaKnown RBP7.77□□□□□ -1.17
TPM3-221ENST00000513769 SCRT1Q9BWW7 348 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 SEC11CQ9BY50 192 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 MRPL32Q9BYC8 188 aaKnown RBP7.77□□□□□ -1.17
TPM3-221ENST00000513769 EIF5A2Q9GZV4 153 aaKnown RBP7.77□□□□□ -1.17
TPM3-221ENST00000513769 TNFRSF19Q9NS68 423 aa7.77□□□□□ -1.17
TPM3-221ENST00000513769 IGHV3OR16-10A0A075B7F0 116 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 TRBV7-1A0A0A6YYK4 115 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 I3L521 148 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 K7EIM0 57 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 AP4M1O00189 453 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 YIF1AO95070 293 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 CXorf1O96002 111 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 HSPB1P04792 205 aaKnown RBP7.76□□□□□ -1.17
TPM3-221ENST00000513769 REG1AP05451 166 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 STAG3L2P0CL84 134 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 STAG3L3P0CL85 134 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 CDC34P49427 236 aaPredicted RBP7.76□□□□□ -1.17
TPM3-221ENST00000513769 DEFB112Q30KQ8 113 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 MIC13Q5XKP0 118 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 PQLC2Q6ZP29 291 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 MAPK1IP1LQ8NDC0 245 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 BPIFCQ8NFQ6 507 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 TMEM190Q8WZ59 177 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 ACY3Q96HD9 319 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 USMG5Q96IX5 58 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 NKX6-2Q9C056 277 aaPredicted RBP7.76□□□□□ -1.17
TPM3-221ENST00000513769 VSIRQ9H7M9 311 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 RFNGQ9Y644 331 aa7.76□□□□□ -1.17
TPM3-221ENST00000513769 IGKV1D-37A0A075B6S9 117 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 TRAV41A0A0B4J266 112 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 MAP1LC3B2A6NCE7 125 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 ZP3P21754 424 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 RND2P52198 227 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 ZNF726P1Q15940 193 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 C19orf54Q5BKX5 351 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 ZNF506Q5JVG8 444 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 OR5T1Q8NG75 326 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 MAP1LC3BQ9GZQ8 125 aa7.75□□□□□ -1.17
TPM3-221ENST00000513769 SLC35B3Q9H1N7 401 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms