RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 LGALS1P09382 135 aaKnown RBP2.63□□□□□ -1.99
NUP54-212ENST00000513248 DEFA4P12838 97 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 NFYAP23511 347 aaPredicted RBP2.63□□□□□ -1.99
NUP54-212ENST00000513248 DTYMKP23919 212 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 PSMB8P28062 276 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 S100GP29377 79 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 FGF9P31371 208 aaPredicted RBP2.63□□□□□ -1.99
NUP54-212ENST00000513248 CBX5P45973 191 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 INSL3P51460 131 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 LSM3P62310 102 aaKnown RBP2.63□□□□□ -1.99
NUP54-212ENST00000513248 CATR1Q13166 79 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 KCTD21Q4G0X4 260 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 KPRPQ5T749 579 aaPredicted RBP2.63□□□□□ -1.99
NUP54-212ENST00000513248 HACD4Q5VWC8 232 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 CNIH2Q6PI25 160 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 CD200R1LQ6Q8B3 271 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 FAM159AQ6UWV7 190 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 ZNF562Q6V9R5 426 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 ZNF645Q8N7E2 425 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 OR6Q1Q8NGQ2 317 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 OR4S2Q8NH73 311 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 DYNLRB2Q8TF09 96 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 DCUN1D4Q92564 292 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 BORCS5Q969J3 196 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 PTX4Q96A99 478 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 S100A16Q96FQ6 103 aaKnown RBP2.63□□□□□ -1.99
NUP54-212ENST00000513248 UBE2E2Q96LR5 201 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 C9orf85Q96MD7 179 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 P2RX4Q99571 388 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 NDUFAF3Q9BU61 184 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 ALX4Q9H161 411 aaPredicted RBP2.63□□□□□ -1.99
NUP54-212ENST00000513248 DCSTAMPQ9H295 470 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 HRASLSQ9HDD0 168 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 TAS2R8Q9NYW2 309 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 ANXA10Q9UJ72 324 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 ZNF256Q9Y2P7 627 aaPredicted RBP2.63□□□□□ -1.99
NUP54-212ENST00000513248 DOCK11Q5JSL3 2073 aa2.63□□□□□ -1.99
NUP54-212ENST00000513248 A0A0A6YYH2 397 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 A6NJ64 397 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 K7EIL1 84 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 NOL3O60936 208 aaKnown RBP2.62□□□□□ -1.99
NUP54-212ENST00000513248 DHFRP00374 187 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 HRASP01112 189 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 CT45A10P0DMU9 189 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 CD37P11049 281 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 ZP3P21754 424 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 KIR2DS2P43631 304 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 TAS2R46P59540 309 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 UBE2KP61086 200 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 TSPAN5P62079 268 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 NDPQ00604 133 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 ATP5G2Q06055 141 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 CDK10Q15131 360 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 RPEL1Q2QD12 228 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 AKIRIN2Q53H80 203 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 UBE2NLQ5JXB2 153 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 VAX1Q5SQQ9 334 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 TMEM69Q5SWH9 247 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 AADACL3Q5VUY0 350 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 IDO2Q6ZQW0 420 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 SSX9Q7RTT3 188 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 ZNF429Q86V71 674 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 TMEM17Q86X19 198 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 SNX29P2Q8IUI4 249 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 H1FOOQ8IZA3 346 aaPredicted RBP2.62□□□□□ -1.99
NUP54-212ENST00000513248 OR13F1Q8NGS4 319 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 OR5H6Q8NGV6 325 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 OR5H2Q8NGV7 314 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 VSTM2AQ8TAG5 236 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 HSD17B10Q99714 261 aaKnown RBP2.62□□□□□ -1.99
NUP54-212ENST00000513248 SPIN2AQ99865 258 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 SPIN2BQ9BPZ2 258 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 AGMATQ9BSE5 352 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 HINT2Q9BX68 163 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 RNF167Q9H6Y7 350 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 CCL28Q9NRJ3 127 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 EHFQ9NZC4 300 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 COMMD3Q9UBI1 195 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 PEF1Q9UBV8 284 aaKnown RBP2.62□□□□□ -1.99
NUP54-212ENST00000513248 RBMX2Q9Y388 322 aaKnown RBP2.62□□□□□ -1.99
NUP54-212ENST00000513248 NUBP2Q9Y5Y2 271 aa2.62□□□□□ -1.99
NUP54-212ENST00000513248 ANK3Q12955 4377 aaKnown RBP2.61□□□□□ -1.99
NUP54-212ENST00000513248 IGKV1D-8A0A087WSZ0 117 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 FAM223BA6NKX1 122 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 H0Y980 276 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 H3BUA1 57 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 I3L521 148 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 SULT1C2O00338 296 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 RGS5O15539 181 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 SOX15O60248 233 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 ATP6V1G1O75348 118 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 SNAPC5O75971 98 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 OR2J3O76001 311 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 OR2A4O95047 310 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 PPYP01298 95 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 PMP2P02689 132 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 PRH1P02810 166 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 IFNA6P05013 189 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 P0C879 139 aa2.61□□□□□ -1.99
NUP54-212ENST00000513248 SAA1P0DJI8 122 aaPredicted RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms