RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 THBS3P49746 956 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 RAB11AP62491 216 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 KRTAP21-3Q3LHN1 58 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 Q6ZS46 218 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 ANAPC16Q96DE5 110 aa13.1□□□□□ -0.31
HMGCL-209ENST00000513148 IGSF23A1L1A6 192 aa13.09□□□□□ -0.31
HMGCL-209ENST00000513148 UCP1P25874 307 aa13.09□□□□□ -0.31
HMGCL-209ENST00000513148 CYP2G1PQ6ZSU1 146 aa13.09□□□□□ -0.31
HMGCL-209ENST00000513148 OR4F5Q8NH21 305 aa13.09□□□□□ -0.31
HMGCL-209ENST00000513148 OR5B12Q96R08 314 aa13.09□□□□□ -0.31
HMGCL-209ENST00000513148 A0A1W2PPQ1 181 aa13.08□□□□□ -0.31
HMGCL-209ENST00000513148 HPRT1P00492 218 aa13.08□□□□□ -0.31
HMGCL-209ENST00000513148 AMY1AP04745 511 aa13.08□□□□□ -0.31
HMGCL-209ENST00000513148 IL6RP08887 468 aaPredicted RBP13.08□□□□□ -0.31
HMGCL-209ENST00000513148 GNRHRP30968 328 aa13.08□□□□□ -0.31
HMGCL-209ENST00000513148 RPL30P62888 115 aaKnown RBP13.08□□□□□ -0.31
HMGCL-209ENST00000513148 C5orf56Q8N8D9 126 aa13.08□□□□□ -0.31
HMGCL-209ENST00000513148 ZNF702PQ9H963 129 aa13.08□□□□□ -0.31
HMGCL-209ENST00000513148 TMEM89A2RUT3 159 aa13.08□□□□□ -0.32
HMGCL-209ENST00000513148 FAM24AA6NFZ4 105 aa13.08□□□□□ -0.32
HMGCL-209ENST00000513148 NDUFA7O95182 113 aa13.08□□□□□ -0.32
HMGCL-209ENST00000513148 IFNA1P01562 189 aa13.08□□□□□ -0.32
HMGCL-209ENST00000513148 NKX2-1P43699 371 aaPredicted RBP13.08□□□□□ -0.32
HMGCL-209ENST00000513148 FOXL1Q12952 345 aa13.08□□□□□ -0.32
HMGCL-209ENST00000513148 PDPNQ86YL7 162 aa13.08□□□□□ -0.32
HMGCL-209ENST00000513148 LINC01006Q8NI28 216 aa13.08□□□□□ -0.32
HMGCL-209ENST00000513148 ADTRPQ96IZ2 230 aa13.08□□□□□ -0.32
HMGCL-209ENST00000513148 HSD17B10Q99714 261 aaKnown RBP13.08□□□□□ -0.32
HMGCL-209ENST00000513148 ATP5SQ99766 215 aa13.08□□□□□ -0.32
HMGCL-209ENST00000513148 PRSS22Q9GZN4 317 aa13.08□□□□□ -0.32
HMGCL-209ENST00000513148 FCGR3BO75015 233 aa13.07□□□□□ -0.32
HMGCL-209ENST00000513148 RPS16P62249 146 aaKnown RBP13.07□□□□□ -0.32
HMGCL-209ENST00000513148 RTL8BQ17RB0 113 aa13.07□□□□□ -0.32
HMGCL-209ENST00000513148 TMEM95Q3KNT9 176 aa13.07□□□□□ -0.32
HMGCL-209ENST00000513148 PHLDA2Q53GA4 152 aa13.07□□□□□ -0.32
HMGCL-209ENST00000513148 COL5A1-AS1Q5SY13 56 aa13.07□□□□□ -0.32
HMGCL-209ENST00000513148 Q8N9W7 124 aa13.07□□□□□ -0.32
HMGCL-209ENST00000513148 OR51H1Q8NH63 302 aa13.07□□□□□ -0.32
HMGCL-209ENST00000513148 OR2T6Q8NHC8 308 aa13.07□□□□□ -0.32
HMGCL-209ENST00000513148 DDB2Q92466 427 aa13.07□□□□□ -0.32
HMGCL-209ENST00000513148 SLC2A9Q9NRM0 540 aa13.07□□□□□ -0.32
HMGCL-209ENST00000513148 PIGBOS1A0A0B4J2F0 54 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 HRASP01112 189 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 EIF4EBP1Q13541 118 aaPredicted RBP13.06□□□□□ -0.32
HMGCL-209ENST00000513148 DMRTA1Q5VZB9 504 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 OR5C1Q8NGR4 320 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 FLYWCH2Q96CP2 140 aaKnown RBP13.06□□□□□ -0.32
HMGCL-209ENST00000513148 TMEM56Q96MV1 263 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 TMEM56-RWDD3S4R434 201 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 MAP1LC3B2A6NCE7 125 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 NBR2O15453 112 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 SOX15O60248 233 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 SCGB1D1O95968 90 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 CNN1P51911 297 aaKnown RBP13.06□□□□□ -0.32
HMGCL-209ENST00000513148 VAMP2P63027 116 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 TEX43Q6ZNM6 134 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 HARBI1Q96MB7 349 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 RASL11BQ9BPW5 248 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 PSMG3Q9BT73 122 aaPredicted RBP13.06□□□□□ -0.32
HMGCL-209ENST00000513148 MAP1LC3BQ9GZQ8 125 aa13.06□□□□□ -0.32
HMGCL-209ENST00000513148 TMEM250H0YL14 139 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 HAX1O00165 279 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 GALR1P47211 349 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 RPL29P47914 159 aaKnown RBP13.05□□□□□ -0.32
HMGCL-209ENST00000513148 ID3Q02535 119 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 PLGLAQ15195 96 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 MSMO1Q15800 293 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 SP6Q3SY56 376 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 ZBTB34Q8NCN2 500 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 GNG13Q9P2W3 67 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 RNF114Q9Y508 228 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 TENM1Q9UKZ4 2725 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 H7BYZ3 331 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 CDKN1BP46527 198 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 ELLP55199 621 aaPredicted RBP13.05□□□□□ -0.32
HMGCL-209ENST00000513148 PAFAH1B2P68402 229 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 SERF2P84101 59 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 BSXQ3C1V8 233 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 ZNF705AQ6ZN79 300 aaPredicted RBP13.05□□□□□ -0.32
HMGCL-209ENST00000513148 FBXL15Q9H469 300 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 C16orf95Q9H693 158 aa13.05□□□□□ -0.32
HMGCL-209ENST00000513148 AURKAIP1Q9NWT8 199 aaPredicted RBP13.05□□□□□ -0.32
HMGCL-209ENST00000513148 CLPSL1A2RUU4 121 aa13.04□□□□□ -0.32
HMGCL-209ENST00000513148 K7EP13 123 aa13.04□□□□□ -0.32
HMGCL-209ENST00000513148 KBTBD11O94819 623 aa13.04□□□□□ -0.32
HMGCL-209ENST00000513148 RBX1P62877 108 aa13.04□□□□□ -0.32
HMGCL-209ENST00000513148 CATR1Q13166 79 aa13.04□□□□□ -0.32
HMGCL-209ENST00000513148 C12orf54Q6X4T0 127 aa13.04□□□□□ -0.32
HMGCL-209ENST00000513148 PARD6GQ9BYG4 376 aaPredicted RBP13.04□□□□□ -0.32
HMGCL-209ENST00000513148 LIN7CQ9NUP9 197 aaKnown RBP13.04□□□□□ -0.32
HMGCL-209ENST00000513148 SLC25A17O43808 307 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 RAMP3O60896 148 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 PGLYRP1O75594 196 aaPredicted RBP13.03□□□□□ -0.32
HMGCL-209ENST00000513148 IFNA5P01569 189 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 VDAC2P45880 294 aaPredicted RBP13.03□□□□□ -0.32
HMGCL-209ENST00000513148 NPBQ8NG41 125 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 TMEM222Q9H0R3 208 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 RRHO14718 337 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 NDUFA3O95167 84 aa13.03□□□□□ -0.32
HMGCL-209ENST00000513148 BRWD1-AS2P59051 145 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms