RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, human

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KDM3B-208	ENST00000512928	IGHV7-4-1	A0A0J9YVY3	117 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	LINC00854	A0A1B0GVQ3	168 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	FAM240B	A0A1B0GVZ2	78 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	C9orf170	A2RU37	121 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	RBMY1B	A6NDE4	496 aa	Known RBP	4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	RBMY1E	A6NEQ0	496 aa	Known RBP	4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	C3orf84	H3BNL1	204 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928		K7EMT4	169 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	RBMY1D	P0C7P1	496 aa	Known RBP	4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	C8orf88	P0DMB2	117 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	LYL1	P12980	280 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	ANXA7	P20073	488 aa	Known RBP	4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	BMI1	P35226	326 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	HTR2B	P41595	481 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	IL15RA	Q13261	267 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	LYZL2	Q7Z4W2	148 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	LYG2	Q86SG7	212 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	WFDC3	Q8IUB2	231 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	GBGT1	Q8N5D6	347 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	SLC24A4	Q8NFF2	622 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	OR1S1	Q8NH92	325 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	RNF2	Q99496	336 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	SPAG8	Q99932	426 aa	Predicted RBP	4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	GGTLC1	Q9BX51	225 aa		4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	PAIP2B	Q9ULR5	123 aa	Known RBP	4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
KDM3B-208	ENST00000512928	TENM2	Q9NT68	2774 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	PIGBOS1	A0A0B4J2F0	54 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	RPS10-NUDT3	A0A1W2PQS6	291 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	SNRPGP15	A8MWD9	76 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	FAM25E	A8MYX2	175 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	DNASE2	O00115	360 aa	Predicted RBP	4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	CHEK1	O14757	476 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	TSPAN4	O14817	238 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	PRAF2	O60831	178 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	IFNA10	P01566	189 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	RPL35A	P18077	110 aa	Known RBP	4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	NPY1R	P25929	384 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	FCGR2B	P31994	310 aa	Predicted RBP	4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	RND2	P52198	227 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	DEFA1	P59665	94 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	DEFA3	P59666	94 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	SMCO1	Q147U7	214 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	MLANA	Q16655	118 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	TIGIT	Q495A1	244 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	CASC10	Q5T4H9	136 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	TOMM20L	Q6UXN7	152 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	ZNF600	Q6ZNG1	722 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	TCF24	Q7RTU0	167 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	LGI3	Q8N145	548 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	ZNF431	Q8TF32	576 aa	Predicted RBP	4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	ACY3	Q96HD9	319 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	NARS2	Q96I59	477 aa	Known RBP	4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	CITED4	Q96RK1	184 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	KRTAP17-1	Q9BYP8	105 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	FNDC4	Q9H6D8	234 aa	Predicted RBP	4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	TMEM231	Q9H6L2	316 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	HSPB7	Q9UBY9	170 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	SMPX	Q9UHP9	88 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	TMED3	Q9Y3Q3	217 aa		4.86	□□□□□ -1.63
KDM3B-208	ENST00000512928	DNAH7	Q8WXX0	4024 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928		A0A1B0GU03	582 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	FAM90A26	D6RGX4	464 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928		J3QL48	77 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	CLN5	O75503	358 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	TMEM50A	O95807	157 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	APOH	P02749	345 aa	Predicted RBP	4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	IFNA4	P05014	189 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	H2AFB2	P0C5Z0	115 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	IAPP	P10997	89 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	NPPC	P23582	126 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	OR10J1	P30954	320 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	APOC4	P55056	127 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	PAFAH1B2	P68402	229 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	TNFRSF9	Q07011	255 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	LINC00322	Q6ZN03	302 aa	Predicted RBP	4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	NOXA1	Q86UR1	476 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	APRG1	Q8IVJ8	170 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	OR4D5	Q8NGN0	318 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	OR4X1	Q8NH49	305 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	RNASEH2C	Q8TDP1	164 aa	Known RBP	4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	DTD1	Q8TEA8	209 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	ST8SIA2	Q92186	375 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	ZNF414	Q96IQ9	312 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	OR10C1	Q96KK4	312 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	METTL26	Q96S19	204 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	RBKS	Q9H477	322 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	C11orf1	Q9H5F2	150 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	MRPL36	Q9P0J6	103 aa	Known RBP	4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	CACFD1	Q9UGQ2	172 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	RABAC1	Q9UI14	185 aa		4.85	□□□□□ -1.63
KDM3B-208	ENST00000512928	TRAV6	A0A075B6T7	132 aa		4.84	□□□□□ -1.63
KDM3B-208	ENST00000512928	TRAV30	A0A087WSZ9	112 aa		4.84	□□□□□ -1.63
KDM3B-208	ENST00000512928	TMEM238L	A0A1B0GVL6	79 aa		4.84	□□□□□ -1.63
KDM3B-208	ENST00000512928		A0A1W2PS18	150 aa		4.84	□□□□□ -1.63
KDM3B-208	ENST00000512928	MPTX1	A8MV57	137 aa		4.84	□□□□□ -1.63
KDM3B-208	ENST00000512928	INMT-MINDY4	F8WBC2	141 aa		4.84	□□□□□ -1.63
KDM3B-208	ENST00000512928	DFFB	O76075	338 aa		4.84	□□□□□ -1.63
KDM3B-208	ENST00000512928	HOXB5	P09067	269 aa		4.84	□□□□□ -1.63
KDM3B-208	ENST00000512928	SLC25A4	P12235	298 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms