RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 INMT-MINDY4F8WBC2 141 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 MKRN2OSH3BPM6 223 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 TOX3O15405 576 aaPredicted RBP-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 S100A9P06702 114 aaKnown RBP-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 HIST1H2BOP23527 126 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 HOXA6P31267 233 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 HIST1H2BBP33778 126 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 HIST1H2BDP58876 126 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 HIST1H2BCP62807 126 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 CCL20P78556 96 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 IFITM2Q01629 132 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 CAV1Q03135 178 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 ANGPT1Q15389 498 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 BATFQ16520 125 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 GUK1Q16774 197 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 HIST2H2BEQ16778 126 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 KRTAP19-8Q3LI54 63 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 LINC01554Q52M75 96 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 COQ5Q5HYK3 327 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 SPANXN3Q5MJ09 141 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 HIST2H2BFQ5QNW6 126 aaPredicted RBP-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 TNFAIP8L2Q6P589 184 aaPredicted RBP-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 PLEKHG7Q6ZR37 379 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 MIR17HGQ75NE6 70 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 COPS6Q7L5N1 327 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 CD302Q8IX05 232 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 ST6GALNAC3Q8NDV1 305 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 PLPP5Q8NEB5 264 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 GPR32P1Q8NGA4 272 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 DNAJB3Q8WWF6 145 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 KLK6Q92876 244 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 HIST1H2BHQ93079 126 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 IMP4Q96G21 291 aaKnown RBP-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 DIRAS2Q96HU8 199 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 CNBD2Q96M20 576 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 HIST1H2BNQ99877 126 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 HIST1H2BMQ99879 126 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 DCUN1D5Q9BTE7 237 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 C6orf62Q9GZU0 229 aaPredicted RBP-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 C14orf105Q9NVL8 296 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 MED29Q9NX70 200 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 TAS2R7Q9NYW3 318 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 JPT1Q9UK76 154 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 EPDR1Q9UM22 224 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 TNFSF18Q9UNG2 199 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 POLR1DQ9Y2S0 133 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 C15orf41Q9Y2V0 281 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 ZFHX4Q86UP3 3567 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 RIC1Q4ADV7 1423 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 TACC2O95359 2948 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 KIAA1549Q9HCM3 1950 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 TLN1Q9Y490 2541 aaKnown RBP-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 A0A0C4DFX4 3053 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 SRCAPQ6ZRS2 3230 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 ITPR2Q14571 2701 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 CFAP46Q8IYW2 2715 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 TRRAPQ9Y4A5 3859 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 CCDC168Q8NDH2 2452 aa-0.16□□□□□ -2.44
PDGFC-208ENST00000512711 TRANK1O15050 2925 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 PKHD1L1Q86WI1 4243 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 FAM186AA6NE01 2351 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 F8P00451 2351 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 UNC80Q8N2C7 3258 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 DCHS1Q96JQ0 3298 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 ANK3Q12955 4377 aaKnown RBP-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 C5orf67F2Z3F1 127 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 BIRC5O15392 142 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 CCL16O15467 120 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 HPGDSO60760 199 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 HLA-DRAP01903 254 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 IVLP07476 585 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 COX6A1P12074 109 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 HBA1P69905 142 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 QRFPP83859 136 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 PMS2P3Q13401 168 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 C12orf74Q32Q52 190 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 SDHAF4Q5VUM1 108 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 CST9Q5W186 159 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 RPL22L1Q6P5R6 122 aaKnown RBP-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 FUNDC1Q8IVP5 155 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 SIGLECL1Q8N7X8 197 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 LINC00301Q8NCQ3 95 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 TMEM161BQ8NDZ6 487 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 NBEAQ8NFP9 2946 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 ITFG2Q969R8 447 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 GPR146Q96CH1 333 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 SMIM19Q96E16 107 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 ZC2HC1AQ96GY0 325 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 KCTD7Q96MP8 289 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 WDR61Q9GZS3 305 aaKnown RBP-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 OR51V1Q9H2C8 321 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 MIXL1Q9H2W2 232 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 OR51I2Q9H344 312 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 XPNPEP1Q9NQW7 623 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 SLC39A9Q9NUM3 307 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 TP73-AS1Q9UF72 201 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 SLC35A3Q9Y2D2 325 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 DNAH6Q9C0G6 4158 aa-0.17□□□□□ -2.44
PDGFC-208ENST00000512711 GCN1Q92616 2671 aaKnown RBP-0.17□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms