RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 WFDC3Q8IUB2 231 aa8.86□□□□□ -0.99
CDK7-208ENST00000512687 HEYLQ9NQ87 328 aaPredicted RBP8.86□□□□□ -0.99
CDK7-208ENST00000512687 SCP2D1Q9UJQ7 156 aa8.86□□□□□ -0.99
CDK7-208ENST00000512687 TP53TG1Q9Y2A0 90 aa8.86□□□□□ -0.99
CDK7-208ENST00000512687 KIR2DL5BA0A0G2JN68 375 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 KIR2DL5BA0A0G2JPC4 375 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 CEBPZOSA8MTT3 80 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 SPRY2O43597 315 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 IGLC1P0CG04 106 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 SULT1A3P0DMM9 295 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 SULT1A4P0DMN0 295 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 RND2P52198 227 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 LYZL2Q7Z4W2 148 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 KIR2DL5AQ8N109 375 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 SLC24A4Q8NFF2 622 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 KIR2DL5BQ8NHK3 375 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 IL17DQ8TAD2 202 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 IL22RA2Q969J5 263 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 RNF183Q96D59 192 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 MS4A6AQ9H2W1 248 aa8.85□□□□□ -0.99
CDK7-208ENST00000512687 EPPK1P58107 5090 aaKnown RBP8.85□□□□□ -0.99
CDK7-208ENST00000512687 UBE2CO00762 179 aa8.84□□□□□ -0.99
CDK7-208ENST00000512687 NPY1RP25929 384 aa8.84□□□□□ -0.99
CDK7-208ENST00000512687 CRYBB3P26998 211 aa8.84□□□□□ -0.99
CDK7-208ENST00000512687 PYDC2Q56P42 97 aa8.84□□□□□ -0.99
CDK7-208ENST00000512687 PRSS54Q6PEW0 395 aa8.84□□□□□ -0.99
CDK7-208ENST00000512687 LYG2Q86SG7 212 aa8.84□□□□□ -0.99
CDK7-208ENST00000512687 HSPB7Q9UBY9 170 aa8.84□□□□□ -0.99
CDK7-208ENST00000512687 A0A0B4J2A0 478 aa8.83□□□□□ -1
CDK7-208ENST00000512687 RPS10-NUDT3A0A1W2PQS6 291 aa8.83□□□□□ -1
CDK7-208ENST00000512687 CCDC160A6NGH7 325 aa8.83□□□□□ -1
CDK7-208ENST00000512687 NPPCP23582 126 aa8.83□□□□□ -1
CDK7-208ENST00000512687 BMI1P35226 326 aa8.83□□□□□ -1
CDK7-208ENST00000512687 TNFRSF9Q07011 255 aa8.83□□□□□ -1
CDK7-208ENST00000512687 SMCO1Q147U7 214 aa8.83□□□□□ -1
CDK7-208ENST00000512687 RBMS2Q15434 407 aaKnown RBP8.83□□□□□ -1
CDK7-208ENST00000512687 LEMD1Q68G75 181 aa8.83□□□□□ -1
CDK7-208ENST00000512687 CCDC190Q86UF4 302 aa8.83□□□□□ -1
CDK7-208ENST00000512687 STPG3Q8N7X2 389 aa8.83□□□□□ -1
CDK7-208ENST00000512687 RNASEH2CQ8TDP1 164 aaKnown RBP8.83□□□□□ -1
CDK7-208ENST00000512687 SCGB3A2Q96PL1 93 aa8.83□□□□□ -1
CDK7-208ENST00000512687 RBKSQ9H477 322 aa8.83□□□□□ -1
CDK7-208ENST00000512687 SHPKQ9UHJ6 478 aa8.83□□□□□ -1
CDK7-208ENST00000512687 KCNIP3Q9Y2W7 256 aa8.83□□□□□ -1
CDK7-208ENST00000512687 OR10J1P30954 320 aa8.82□□□□□ -1
CDK7-208ENST00000512687 P2RY1P47900 373 aa8.82□□□□□ -1
CDK7-208ENST00000512687 CCR6P51684 374 aa8.82□□□□□ -1
CDK7-208ENST00000512687 DEFB131AP59861 70 aa8.82□□□□□ -1
CDK7-208ENST00000512687 PAFAH1B2P68402 229 aa8.82□□□□□ -1
CDK7-208ENST00000512687 PMS2P11Q13670 270 aa8.82□□□□□ -1
CDK7-208ENST00000512687 USF2Q15853 346 aaPredicted RBP8.82□□□□□ -1
CDK7-208ENST00000512687 TMED4Q7Z7H5 227 aa8.82□□□□□ -1
CDK7-208ENST00000512687 LGI3Q8N145 548 aa8.82□□□□□ -1
CDK7-208ENST00000512687 TOMM5Q8N4H5 51 aa8.82□□□□□ -1
CDK7-208ENST00000512687 OR1S2Q8NGQ3 325 aa8.82□□□□□ -1
CDK7-208ENST00000512687 DTD1Q8TEA8 209 aa8.82□□□□□ -1
CDK7-208ENST00000512687 NPIPB3Q92617 1050 aa8.82□□□□□ -1
CDK7-208ENST00000512687 METTL26Q96S19 204 aa8.82□□□□□ -1
CDK7-208ENST00000512687 RABAC1Q9UI14 185 aa8.82□□□□□ -1
CDK7-208ENST00000512687 U3KQE9 123 aa8.82□□□□□ -1
CDK7-208ENST00000512687 TRAV30A0A087WSZ9 112 aa8.81□□□□□ -1
CDK7-208ENST00000512687 TRAV2A0A0B4J234 112 aa8.81□□□□□ -1
CDK7-208ENST00000512687 K7EQG2 157 aa8.81□□□□□ -1
CDK7-208ENST00000512687 DNASE2O00115 360 aaPredicted RBP8.81□□□□□ -1
CDK7-208ENST00000512687 CD5P06127 495 aa8.81□□□□□ -1
CDK7-208ENST00000512687 SLC25A4P12235 298 aa8.81□□□□□ -1
CDK7-208ENST00000512687 FAUP35544 74 aaKnown RBP8.81□□□□□ -1
CDK7-208ENST00000512687 YPEL3P61236 119 aaPredicted RBP8.81□□□□□ -1
CDK7-208ENST00000512687 RPL11P62913 178 aaKnown RBP8.81□□□□□ -1
CDK7-208ENST00000512687 STXBP6Q8NFX7 210 aa8.81□□□□□ -1
CDK7-208ENST00000512687 GLMPQ8WWB7 406 aa8.81□□□□□ -1
CDK7-208ENST00000512687 ACY3Q96HD9 319 aa8.81□□□□□ -1
CDK7-208ENST00000512687 CSTL1Q9H114 145 aa8.81□□□□□ -1
CDK7-208ENST00000512687 TMEM231Q9H6L2 316 aa8.81□□□□□ -1
CDK7-208ENST00000512687 KMT2AQ03164 3969 aa8.81□□□□□ -1
CDK7-208ENST00000512687 MPTX1A8MV57 137 aa8.8□□□□□ -1
CDK7-208ENST00000512687 PITX3O75364 302 aa8.8□□□□□ -1
CDK7-208ENST00000512687 SCGB2A1O75556 95 aa8.8□□□□□ -1
CDK7-208ENST00000512687 IFNA10P01566 189 aa8.8□□□□□ -1
CDK7-208ENST00000512687 ATF4P18848 351 aaPredicted RBP8.8□□□□□ -1
CDK7-208ENST00000512687 CMC4P56277 68 aaPredicted RBP8.8□□□□□ -1
CDK7-208ENST00000512687 AP3S2P59780 193 aa8.8□□□□□ -1
CDK7-208ENST00000512687 TMEM128Q5BJH2 165 aa8.8□□□□□ -1
CDK7-208ENST00000512687 OR1S1Q8NH92 325 aa8.8□□□□□ -1
CDK7-208ENST00000512687 DCANP1Q8TF63 244 aa8.8□□□□□ -1
CDK7-208ENST00000512687 SRRQ9GZT4 340 aa8.8□□□□□ -1
CDK7-208ENST00000512687 IGKV1D-37A0A075B6S9 117 aa8.79□□□□□ -1
CDK7-208ENST00000512687 A0A1W2PS18 150 aa8.79□□□□□ -1
CDK7-208ENST00000512687 CXorf65A6NEN9 183 aa8.79□□□□□ -1
CDK7-208ENST00000512687 JTBO76095 146 aa8.79□□□□□ -1
CDK7-208ENST00000512687 TOMM40O96008 361 aa8.79□□□□□ -1
CDK7-208ENST00000512687 CA1P00915 261 aaPredicted RBP8.79□□□□□ -1
CDK7-208ENST00000512687 IL4P05112 153 aa8.79□□□□□ -1
CDK7-208ENST00000512687 HNRNPCP07910 306 aaKnown RBP eCLIP8.79□□□□□ -1
CDK7-208ENST00000512687 ZNF688P0C7X2 276 aa8.79□□□□□ -1
CDK7-208ENST00000512687 IAPPP10997 89 aa8.79□□□□□ -1
CDK7-208ENST00000512687 ANXA3P12429 323 aa8.79□□□□□ -1
CDK7-208ENST00000512687 S100A5P33763 92 aa8.79□□□□□ -1
CDK7-208ENST00000512687 SRPXP78539 464 aa8.79□□□□□ -1
CDK7-208ENST00000512687 PPP1R1AQ13522 171 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms