RNA–Protein interactions for RNA: ENST00000512632.5

LIMCH1-215, Transcript of LIM and calponin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMCH1, Length 4,792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-215ENST00000512632 RNASEKQ6P5S7 137 aaKnown RBP7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 Q6ZVH6 145 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 STPG4Q8N801 248 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 FAM169BQ8N8A8 192 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 C19orf24Q9BVV8 132 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 PSMB11A5LHX3 300 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 H0YJW9 148 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 PEX7O00628 323 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 ENSAO43768 121 aaKnown RBP7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 SLC25A17O43808 307 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 HYPMO75409 117 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 DLX1P56177 255 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 TCF24Q7RTU0 167 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 C11orf42Q8N5U0 333 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 OR10X1Q8NGY0 326 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 CCL17Q92583 94 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 TPSG1Q9NRR2 321 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 DSCAML1Q8TD84 2053 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 IGLC2P0DOY2 106 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 IGLC3P0DOY3 106 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 GATA4P43694 442 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 HNRNPA3P51991 378 aaKnown RBP7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 TBR1Q16650 682 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 COX19Q49B96 90 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 COL5A1-AS1Q5SY13 56 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 RUSC1-AS1Q66K80 236 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 ZADH2Q8N4Q0 377 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 OR2D3Q8NGH3 330 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 OSR1Q8TAX0 266 aaPredicted RBP7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 ASCL3Q9NQ33 180 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 ZGRF1Q86YA3 2104 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 PGPA6NDG6 321 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 HIGD1CA8MV81 97 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 M0QZ24 198 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 FTH1P19P0C7X4 201 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 CD40P25942 277 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 CTRLP40313 264 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 FOXA3P55318 350 aaPredicted RBP7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 LINC00305Q7Z4B0 112 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 CACNG8Q8WXS5 425 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 NCOR1P1Q9H4R4 102 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 ZNF430Q9H8G1 570 aaPredicted RBP7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 DYSFO75923 2080 aa7.48□□□□□ -1.21
LIMCH1-215ENST00000512632 VWC2LB2RUY7 222 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 SLC25A5P05141 298 aaKnown RBP7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 ZNF329Q86UD4 541 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 WFDC8Q8IUA0 241 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 OR1B1Q8NGR6 318 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 RITA1Q96K30 269 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 MRPL32Q9BYC8 188 aaKnown RBP7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 SAP30LQ9HAJ7 183 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 UQCR10Q9UDW1 63 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 SH3BGRL2Q9UJC5 107 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 SH2D7A6NKC9 451 aaPredicted RBP7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 CGB1A6NKQ9 187 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 TOX4O94842 621 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 HINT1P49773 126 aaPredicted RBP7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 UBE2G1P62253 170 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 LEMD1Q68G75 181 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 TMEM200BQ69YZ2 307 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 DMXL1Q9Y485 3027 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 ABCA4P78363 2273 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 M0R2Z0 102 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 TM4SF5O14894 197 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 PNKDQ8N490 385 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 ZNF714Q96N38 554 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 LINC00312Q9Y6C7 94 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 NBASA2RRP1 2371 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 APC2O95996 2303 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 MALRD1Q5VYJ5 2156 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 FCN3O75636 299 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 PMCHL1Q16048 86 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 LYPD2Q6UXB3 125 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 ZNF841Q6ZN19 808 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 GSX1Q9H4S2 264 aaPredicted RBP7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 SSUH2Q9Y2M2 353 aa7.47□□□□□ -1.21
LIMCH1-215ENST00000512632 SPTA1P02549 2419 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 IGKV1D-37A0A075B6S9 117 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 K7EM74 188 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 SIAH2O43255 324 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 TCF21O43680 179 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 EBLN2Q6P2I7 272 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 ZNF833PQ6ZTB9 187 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 OR5AN1Q8NGI8 311 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 FXYD5Q96DB9 178 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 GAL3ST2Q9H3Q3 398 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 CLEC5AQ9NY25 188 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 LAMTOR2Q9Y2Q5 125 aa7.46□□□□□ -1.21
LIMCH1-215ENST00000512632 KIR3DL3Q8N743 410 aa7.46□□□□□ -1.22
LIMCH1-215ENST00000512632 OR4C13Q8NGP0 309 aa7.46□□□□□ -1.22
LIMCH1-215ENST00000512632 MBD6Q96DN6 1003 aa7.46□□□□□ -1.22
LIMCH1-215ENST00000512632 TCRBV4S1A1TA0A5B7 111 aa7.46□□□□□ -1.22
LIMCH1-215ENST00000512632 NKX6-3A6NJ46 265 aa7.46□□□□□ -1.22
LIMCH1-215ENST00000512632 OR1L4Q8NGR5 311 aa7.46□□□□□ -1.22
LIMCH1-215ENST00000512632 TNFRSF19Q9NS68 423 aa7.46□□□□□ -1.22
LIMCH1-215ENST00000512632 ZNF137PP52743 207 aa7.46□□□□□ -1.22
LIMCH1-215ENST00000512632 ATP5IP56385 69 aaPredicted RBP7.46□□□□□ -1.22
LIMCH1-215ENST00000512632 LINC00322Q6ZN03 302 aaPredicted RBP7.46□□□□□ -1.22
LIMCH1-215ENST00000512632 PDPNQ86YL7 162 aa7.46□□□□□ -1.22
LIMCH1-215ENST00000512632 MED13LQ71F56 2210 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms