RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 DBX1A6NMT0 343 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 LGALS9O00182 355 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 CDS2O95674 445 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 IGKV1-5P01602 117 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 SLC25A4P12235 298 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 HLA-DMBP28068 263 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 S100GP29377 79 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 S100A11P31949 105 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 G6PCP35575 357 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 RHOGP84095 191 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 POU2AF1Q16633 256 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 RTL8BQ17RB0 113 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 IZUMO4Q1ZYL8 232 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 Q6ZRM9 215 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 PUSL1Q8N0Z8 303 aaKnown RBP6.62□□□□□ -1.35
NUP54-211ENST00000512151 OR1L6Q8NGR2 347 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 OSR1Q8TAX0 266 aaPredicted RBP6.62□□□□□ -1.35
NUP54-211ENST00000512151 SEC22AQ96IW7 307 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 HARBI1Q96MB7 349 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 TMEM56Q96MV1 263 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 RNF5Q99942 180 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 RNF126Q9BV68 326 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 TMEM222Q9H0R3 208 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 PLEKHA2Q9HB19 425 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 TMEM56-RWDD3S4R434 201 aa6.62□□□□□ -1.35
NUP54-211ENST00000512151 LINC00862A6NCI5 91 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 KRASP01116 189 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 OR9G9P0C7N8 305 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 P0C879 139 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 RBMY1CP0DJD4 496 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 SAA1P0DJI8 122 aaPredicted RBP6.61□□□□□ -1.35
NUP54-211ENST00000512151 P0DMU3 169 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 FAM231AP0DMU4 169 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 FAM231CP0DMU5 169 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 MYOD1P15172 320 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 VAMP1P23763 118 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 LGALS7P47929 136 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 ZNF124Q15973 351 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 CLLU1Q5K131 121 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 C1orf134Q5TEV5 83 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 TMEM268Q5VZI3 342 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 TMUB2Q71RG4 321 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 SSX9Q7RTT3 188 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 LYZL2Q7Z4W2 148 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 OR2C3Q8N628 320 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 OR5B3Q8NH48 314 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 CD300LFQ8TDQ1 290 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 GPR146Q96CH1 333 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 C18orf15Q96N68 181 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 COMMD9Q9P000 198 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 KCNIP3Q9Y2W7 256 aa6.61□□□□□ -1.35
NUP54-211ENST00000512151 FXYD6-FXYD2A0A087WZ82 144 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 TRBV9A0A0B4J1U6 114 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 TRAV10A0A0B4J240 114 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 RPS10-NUDT3A0A1W2PQS6 291 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 ARPC5O15511 151 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 AMBPP02760 352 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 SERPINE2P07093 398 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 NQO2P16083 231 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 UBE2KP61086 200 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 ATP5G2Q06055 141 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 OR4A47Q6IF82 309 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 SLC35G3Q8N808 338 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 LRTM2Q8N967 370 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 TEX45Q8NA69 505 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 Q8NAQ8 132 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 TMEM167AQ8TBQ9 72 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 TSNAXQ99598 290 aaKnown RBP6.6□□□□□ -1.35
NUP54-211ENST00000512151 TMEM140Q9NV12 185 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 NSG2Q9Y328 171 aa6.6□□□□□ -1.35
NUP54-211ENST00000512151 TRAV25A0A0B4J276 109 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 A0A0D9SG52 128 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 MARCH11A6NNE9 402 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 MPTX1A8MV57 137 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 A8MWP6 167 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 E7EUB6 86 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 UPK2O00526 184 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 GGCTO75223 188 aaKnown RBP6.59□□□□□ -1.35
NUP54-211ENST00000512151 ADAP1O75689 374 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 B3GALNT1O75752 331 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 KBTBD11O94819 623 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 SPDEFO95238 335 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 CFDP00746 253 aaPredicted RBP6.59□□□□□ -1.35
NUP54-211ENST00000512151 HRASP01112 189 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 CYCSP99999 105 aaKnown RBP6.59□□□□□ -1.35
NUP54-211ENST00000512151 ZNF345Q14585 488 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 VMA21Q3ZAQ7 101 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 SOHLH1Q5JUK2 328 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 GPHB5Q86YW7 130 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 APRG1Q8IVJ8 170 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 LGI3Q8N145 548 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 DMBX1Q8NFW5 382 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 OR4A5Q8NH83 315 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 COQ8AQ8NI60 647 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 RBPMSQ93062 196 aaKnown RBP6.59□□□□□ -1.35
NUP54-211ENST00000512151 IL22RA2Q969J5 263 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 TMEM68Q96MH6 324 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 CHRDL1Q9BU40 450 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 PDCD10Q9BUL8 212 aa6.59□□□□□ -1.35
NUP54-211ENST00000512151 NMES1Q9C002 83 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms