RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 RFLNBQ8N5W9 214 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 IQCF6A8MYZ5 107 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 RNF223E7ERA6 249 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 FXYD7P58549 80 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 RMI2Q96E14 147 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 PPP1R3EQ9H7J1 279 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 ANAPC1Q9H1A4 1944 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 SPOCK3Q9BQ16 436 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 CHCHD2Q9Y6H1 151 aaPredicted RBP4.82□□□□□ -1.64
USP38-203ENST00000511739 IGHV3-64A0A075B6Q5 118 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 TRAV8-2A0A0B4J237 113 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 A0A1B0GV72 72 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 C15orf61A6NNL5 157 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 C17orf98A8MV24 154 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 SMIM6P0DI80 62 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 SPTBP11277 2137 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 C1orf100Q5SVJ3 147 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 SUMO4Q6EEV6 95 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 IMMP1LQ96LU5 166 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 VWC2LB2RUY7 222 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 C4orf51C9J302 202 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 CELA3BP08861 270 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 LINC00271P0C7V0 271 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 ZNF876PQ49A33 203 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 OR11H7Q8NGC8 314 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 MRAPQ8TCY5 172 aa4.82□□□□□ -1.64
USP38-203ENST00000511739 MCRIP2Q9BUT9 160 aaKnown RBP4.82□□□□□ -1.64
USP38-203ENST00000511739 TRBV5-5A0A0J9YX44 114 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 CCL1P22362 96 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 UCP1P25874 307 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 PPIFP30405 207 aaKnown RBP4.81□□□□□ -1.64
USP38-203ENST00000511739 VWCEQ96DN2 955 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 SNAI2O43623 268 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 TNFSF13O75888 250 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 ORMDL2Q53FV1 153 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 CEP250Q9BV73 2442 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 TBX6O95947 436 aaPredicted RBP4.81□□□□□ -1.64
USP38-203ENST00000511739 PSG1P11464 419 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 GATA2P23769 480 aaPredicted RBP4.81□□□□□ -1.64
USP38-203ENST00000511739 ERCC8Q13216 396 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 RASL10AQ92737 203 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 C1orf159Q96HA4 380 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 ELF5Q9UKW6 265 aaPredicted RBP4.81□□□□□ -1.64
USP38-203ENST00000511739 UPK2O00526 184 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 F12P00748 615 aaPredicted RBP4.81□□□□□ -1.64
USP38-203ENST00000511739 CTSBP07858 339 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 DMRTA1Q5VZB9 504 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 ZNF329Q86UD4 541 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 NKAPP1Q8N9T2 125 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 PEF1Q9UBV8 284 aaKnown RBP4.81□□□□□ -1.64
USP38-203ENST00000511739 HEATR5BQ9P2D3 2071 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 SCN8AQ9UQD0 1980 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 SAA2-SAA4A0A096LPE2 208 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 A0A0G2JMM0 328 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 A0A1W2PPB8 328 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 A0A1W2PRS3 328 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 KIR3DP1A8MWS1 328 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 M0R2P5 195 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 SAA2P0DJI9 122 aaPredicted RBP4.81□□□□□ -1.64
USP38-203ENST00000511739 CBLN1P23435 193 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 LCN12Q6JVE5 192 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 RASL11AQ6T310 242 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 Q96MF0 132 aa4.81□□□□□ -1.64
USP38-203ENST00000511739 HLA-DQB1P01920 261 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 RND3P61587 244 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 SEC11AP67812 179 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 TMEM187Q14656 261 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 ATXN8Q156A1 80 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 C15orf32Q32M92 178 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 ASPHD2Q6ICH7 369 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 SFTA2Q6UW10 78 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 TNFRSF14Q92956 283 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 WFIKKN1Q96NZ8 548 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 MYLKQ15746 1914 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 IL18BPO95998 194 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 ANXA2RQ3ZCQ2 193 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 MINOS1Q5TGZ0 78 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 CITED2Q99967 270 aaPredicted RBP4.8□□□□□ -1.64
USP38-203ENST00000511739 MINOS1-NBL1R4GNA1 71 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 DPRXA6NFQ7 191 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 PLA2G10O15496 165 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 APOC4P55056 127 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 MIR17HGQ75NE6 70 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 COQ2Q96H96 371 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 CHTOPQ9Y3Y2 248 aaKnown RBP4.8□□□□□ -1.64
USP38-203ENST00000511739 C22orf46C9J442 243 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 IGHMP01871 453 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 NAT1P18440 290 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 HIST1H4AP62805 103 aaKnown RBP4.8□□□□□ -1.64
USP38-203ENST00000511739 C21orf62-AS1Q17RA5 79 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 SPSB3Q6PJ21 355 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 APCDD1LQ8NCL9 501 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 ST6GALNAC3Q8NDV1 305 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 TDRD6O60522 2096 aaKnown RBP4.8□□□□□ -1.64
USP38-203ENST00000511739 SRRM4A7MD48 611 aaKnown RBP4.8□□□□□ -1.64
USP38-203ENST00000511739 YPEL1O60688 119 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 FCN3O75636 299 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 LGALS1P09382 135 aaKnown RBP4.8□□□□□ -1.64
USP38-203ENST00000511739 NPC2P61916 151 aa4.8□□□□□ -1.64
USP38-203ENST00000511739 KLRD1Q13241 179 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms