RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 ARL3P36405 182 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 CDX1P47902 265 aaPredicted RBP4.15□□□□□ -1.74
PROM1-211ENST00000511153 SUB1P53999 127 aaKnown RBP eCLIP4.15□□□□□ -1.74
PROM1-211ENST00000511153 NHLH2Q02577 135 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 CLINT1Q14677 625 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 ACOT7LQ6ZUV0 252 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 SLC16A13Q7RTY0 426 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 OR2T35Q8NGX2 323 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 ZNF502Q8TBZ5 544 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 C4orf3Q8WVX3 66 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 DLX4Q92988 240 aaPredicted RBP4.15□□□□□ -1.74
PROM1-211ENST00000511153 C20orf24Q9BUV8 137 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 RNF126Q9BV68 326 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 C21orf62Q9NYP8 219 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 PEF1Q9UBV8 284 aaKnown RBP4.15□□□□□ -1.74
PROM1-211ENST00000511153 RFNGQ9Y644 331 aa4.15□□□□□ -1.74
PROM1-211ENST00000511153 IGKV3-7A0A075B6H7 116 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 A0A0G2JLM5 398 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 UBE2L5PA0A1B0GUS4 154 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 FAM223BA6NKX1 122 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 LINC01619G3V211 115 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 M0QZ24 198 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 GNG7O60262 68 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 PRB4P10163 310 aaPredicted RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 HIST1H1BP16401 226 aaKnown RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 HOXD3P31249 432 aaPredicted RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 MFAP4P55083 255 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 RAB11AP62491 216 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 ZNF90Q03938 601 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 AKR1C1Q04828 323 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 SLC38A11Q08AI6 406 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 IL15RAQ13261 267 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 RPEL1Q2QD12 228 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 BSXQ3C1V8 233 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 AARDQ4LEZ3 155 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 C2orf83Q53S99 150 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 ZNF343Q6P1L6 599 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 PRSS54Q6PEW0 395 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 UNQ9165/PRO28630Q6UXU0 137 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 FAM223AQ8IWN6 122 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 COMMD1Q8N668 190 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 THAP6Q8TBB0 222 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 MYOZ3Q8TDC0 251 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 SMIM8Q96KF7 97 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 UBE2E2Q96LR5 201 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 TMEM68Q96MH6 324 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 CIB3Q96Q77 187 aaPredicted RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 RAB40CQ96S21 281 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 SRSF8Q9BRL6 282 aaKnown RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 NMES1Q9C002 83 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 SLA2Q9H6Q3 261 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 DOK5Q9P104 306 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 U3KQ87 197 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 ZFP92A6NM28 416 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 FAM90A26D6RGX4 464 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 G3V3Q6 166 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 H3BUA1 57 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 TGOLN2O43493 480 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 EIF3GO75821 320 aaKnown RBP eCLIP4.14□□□□□ -1.75
PROM1-211ENST00000511153 RLN2P04090 185 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 HSPB1P04792 205 aaKnown RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 PVALBP20472 110 aaPredicted RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 OR10J1P30954 320 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 NKX2-5P52952 324 aaPredicted RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 EWSR1Q01844 656 aaKnown RBP eCLIP4.14□□□□□ -1.75
PROM1-211ENST00000511153 CD69Q07108 199 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 ZNF616Q08AN1 781 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 GAMTQ14353 236 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 PDLIM3Q53GG5 364 aaPredicted RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 TMEM182Q6ZP80 229 aaPredicted RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 HSD17B13Q7Z5P4 300 aaPredicted RBP4.14□□□□□ -1.75
PROM1-211ENST00000511153 TMEM252Q8N6L7 170 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 USMG5Q96IX5 58 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 SLC35E1Q96K37 410 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 CXorf58Q96LI9 332 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 PBDC1Q9BVG4 233 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 C11orf1Q9H5F2 150 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 ZFP57Q9NU63 452 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 THYN1Q9P016 225 aa4.14□□□□□ -1.75
PROM1-211ENST00000511153 TRBV7-1A0A0A6YYK4 115 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 PIGBOS1A0A0B4J2F0 54 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 RPS10-NUDT3A0A1W2PQS6 291 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 PMS2P5A8MQ11 134 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 E5RGE8 158 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 G3V4G9 280 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 NUPL2O15504 423 aaKnown RBP4.13□□□□□ -1.75
PROM1-211ENST00000511153 ARPC5O15511 151 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 CYB5BO43169 146 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 APOHP02749 345 aaPredicted RBP4.13□□□□□ -1.75
PROM1-211ENST00000511153 CTSGP08311 255 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 SNRPCP09234 159 aaKnown RBP4.13□□□□□ -1.75
PROM1-211ENST00000511153 GIPP09681 153 aaPredicted RBP4.13□□□□□ -1.75
PROM1-211ENST00000511153 LYZP61626 148 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 RPP30P78346 268 aaKnown RBP4.13□□□□□ -1.75
PROM1-211ENST00000511153 BAXQ07812 192 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 TMEM14EPQ6UXP3 125 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 ZNF114Q8NC26 417 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 OR4F17Q8NGA8 305 aa4.13□□□□□ -1.75
PROM1-211ENST00000511153 OR11H4Q8NGC9 324 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms