RNA–Protein interactions for RNA: ENST00000510906.5

PDPN-209, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-209ENST00000510906 CNPY1Q3B7I2 92 aa6.4□□□□□ -1.38
PDPN-209ENST00000510906 SLC35G3Q8N808 338 aa6.4□□□□□ -1.38
PDPN-209ENST00000510906 RNASE11Q8TAA1 199 aaKnown RBP6.4□□□□□ -1.38
PDPN-209ENST00000510906 LHFPL5Q8TAF8 219 aa6.4□□□□□ -1.38
PDPN-209ENST00000510906 RTBDNQ9BSG5 229 aaPredicted RBP6.4□□□□□ -1.38
PDPN-209ENST00000510906 SLIRPQ9GZT3 109 aaKnown RBP6.4□□□□□ -1.38
PDPN-209ENST00000510906 NAA60Q9H7X0 242 aa6.4□□□□□ -1.38
PDPN-209ENST00000510906 C14orf166Q9Y224 244 aaKnown RBP6.4□□□□□ -1.38
PDPN-209ENST00000510906 FRAS1Q86XX4 4008 aa6.4□□□□□ -1.39
PDPN-209ENST00000510906 IGHV3-49A0A0A0MS15 119 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 TEX13DA0A0J9YY54 714 aaPredicted RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 ANKRD20A5PA0PJZ0 165 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 C15orf62A8K5M9 175 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 INS-IGF2F8WCM5 200 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 K7EMT4 169 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 TSPAN4O14817 238 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 GSTZ1O43708 216 aaPredicted RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 NOL3O60936 208 aaKnown RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 YIF1AO95070 293 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 CDS2O95674 445 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 RNASE2P10153 161 aaKnown RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 FCGR2BP31994 310 aaPredicted RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 TNFSF8P32971 234 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 SNCAP37840 140 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 HOXA1P49639 335 aaPredicted RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 RELQ04864 619 aaPredicted RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 SURF2Q15527 256 aaPredicted RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 ANKRD55Q3KP44 614 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 ODF3L2Q3SX64 289 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 IGFL4Q6B9Z1 124 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 SELENOHQ8IZQ5 122 aaKnown RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 OR51S1Q8NGJ8 323 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 MCFD2Q8NI22 146 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 GLYATL2Q8WU03 294 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 RRNAD1Q96FB5 475 aaKnown RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 TXN2Q99757 166 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 SPAG8Q99932 426 aaPredicted RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 SOSTQ9BQB4 213 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 PDCD10Q9BUL8 212 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 NXF2Q9GZY0 626 aaKnown RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 TMEM222Q9H0R3 208 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 RBM38Q9H0Z9 239 aaKnown RBP6.39□□□□□ -1.39
PDPN-209ENST00000510906 UBQLN2Q9UHD9 624 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 SMPXQ9UHP9 88 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 GPR132Q9UNW8 380 aa6.39□□□□□ -1.39
PDPN-209ENST00000510906 STARD9Q9P2P6 4700 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 IGHV3OR16-13A0A075B7E8 117 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 IGHV3-74A0A0B4J1X5 117 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 IGHV7-4-1A0A0J9YVY3 117 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 CCDC160A6NGH7 325 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 CRYM-AS1A6NIL9 109 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 CHEK1O14757 476 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 GNG7O60262 68 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 B3GALNT1O75752 331 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 PCP4P48539 62 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 PVRIGQ6DKI7 326 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 LAMTOR1Q6IAA8 161 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 TOMM20LQ6UXN7 152 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 TMEM230Q96A57 120 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 GPR146Q96CH1 333 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 OR10C1Q96KK4 312 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 RNF2Q99496 336 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 PRRT1Q99946 306 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 RHPN1-AS1Q9BWJ2 59 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 GGTLC1Q9BX51 225 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 FNDC4Q9H6D8 234 aaPredicted RBP6.38□□□□□ -1.39
PDPN-209ENST00000510906 MRPL36Q9P0J6 103 aaKnown RBP6.38□□□□□ -1.39
PDPN-209ENST00000510906 RABL2AQ9UBK7 228 aaPredicted RBP6.38□□□□□ -1.39
PDPN-209ENST00000510906 RSL24D1Q9UHA3 163 aaKnown RBP6.38□□□□□ -1.39
PDPN-209ENST00000510906 RABL2BQ9UNT1 228 aa6.38□□□□□ -1.39
PDPN-209ENST00000510906 LOC102724200A0A096LPH7 203 aaPredicted RBP6.37□□□□□ -1.39
PDPN-209ENST00000510906 FABP12A6NFH5 140 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 OR4C46A6NHA9 309 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 NPBWR1P48145 328 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 TFPI2P48307 235 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 DHODHQ02127 395 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 BAK1Q16611 211 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 BSXQ3C1V8 233 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 AARDQ4LEZ3 155 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 TMEM268Q5VZI3 342 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 TMEM88Q6PEY1 159 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 FAM219AQ8IW50 185 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 TMEM116Q8NCL8 245 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 DUSP18Q8NEJ0 188 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 RBPMSQ93062 196 aaKnown RBP6.37□□□□□ -1.39
PDPN-209ENST00000510906 ENY2Q9NPA8 101 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.37□□□□□ -1.39
PDPN-209ENST00000510906 MCUBQ9NWR8 336 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 CACNG5Q9UF02 275 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 PUS1Q9Y606 427 aaKnown RBP eCLIP6.37□□□□□ -1.39
PDPN-209ENST00000510906 KIAA1109Q2LD37 5005 aa6.37□□□□□ -1.39
PDPN-209ENST00000510906 IGKV3-7A0A075B6H7 116 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 TRAV14DV4A0A0A6YYC5 116 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 A0A1B0GU03 582 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 CORTO00230 105 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 PRYO14603 147 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 TMEM50AO95807 157 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 APOHP02749 345 aaPredicted RBP6.36□□□□□ -1.39
PDPN-209ENST00000510906 OPRK1P41145 380 aa6.36□□□□□ -1.39
PDPN-209ENST00000510906 SUB1P53999 127 aaKnown RBP eCLIP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms