RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 GPR146Q96CH1 333 aa11.37□□□□□ -0.59
RAB40C-202ENST00000509637 FUNDC2Q9BWH2 189 aa11.37□□□□□ -0.59
RAB40C-202ENST00000509637 NAA50Q9GZZ1 169 aaKnown RBP11.37□□□□□ -0.59
RAB40C-202ENST00000509637 TMEM231Q9H6L2 316 aa11.37□□□□□ -0.59
RAB40C-202ENST00000509637 ABCA13Q86UQ4 5058 aa11.37□□□□□ -0.59
RAB40C-202ENST00000509637 PRSS29PA6NIE9 313 aa11.36□□□□□ -0.59
RAB40C-202ENST00000509637 FXYD7P58549 80 aa11.36□□□□□ -0.59
RAB40C-202ENST00000509637 MEF2DQ14814 521 aa11.36□□□□□ -0.59
RAB40C-202ENST00000509637 TMEM41BQ5BJD5 291 aa11.36□□□□□ -0.59
RAB40C-202ENST00000509637 MARCH1Q8TCQ1 289 aa11.36□□□□□ -0.59
RAB40C-202ENST00000509637 ZNF486Q96H40 463 aaPredicted RBP11.36□□□□□ -0.59
RAB40C-202ENST00000509637 RTBDNQ9BSG5 229 aaPredicted RBP11.36□□□□□ -0.59
RAB40C-202ENST00000509637 MTFP1Q9UDX5 166 aa11.36□□□□□ -0.59
RAB40C-202ENST00000509637 HELTA6NFD8 242 aa11.35□□□□□ -0.59
RAB40C-202ENST00000509637 CORTO00230 105 aa11.35□□□□□ -0.59
RAB40C-202ENST00000509637 BUB3O43684 328 aa11.35□□□□□ -0.59
RAB40C-202ENST00000509637 CD74P04233 296 aa11.35□□□□□ -0.59
RAB40C-202ENST00000509637 HNRNPCP07910 306 aaKnown RBP eCLIP11.35□□□□□ -0.59
RAB40C-202ENST00000509637 SUB1P53999 127 aaKnown RBP eCLIP11.35□□□□□ -0.59
RAB40C-202ENST00000509637 FAAP20Q6NZ36 180 aa11.35□□□□□ -0.59
RAB40C-202ENST00000509637 ZNF705AQ6ZN79 300 aaPredicted RBP11.35□□□□□ -0.59
RAB40C-202ENST00000509637 Q6ZR54 194 aa11.35□□□□□ -0.59
RAB40C-202ENST00000509637 SELENOHQ8IZQ5 122 aaKnown RBP11.35□□□□□ -0.59
RAB40C-202ENST00000509637 NACAE9PAV3 2078 aa11.35□□□□□ -0.59
RAB40C-202ENST00000509637 SMIM31A0A1B0GVY4 71 aa11.34□□□□□ -0.59
RAB40C-202ENST00000509637 ZNF705FA8MVS1 300 aaPredicted RBP11.34□□□□□ -0.59
RAB40C-202ENST00000509637 CDS2O95674 445 aa11.34□□□□□ -0.59
RAB40C-202ENST00000509637 OR5AC1P0C628 307 aa11.34□□□□□ -0.59
RAB40C-202ENST00000509637 ZNF705DP0CH99 300 aaPredicted RBP11.34□□□□□ -0.59
RAB40C-202ENST00000509637 ZNF705BP0CI00 300 aaPredicted RBP11.34□□□□□ -0.59
RAB40C-202ENST00000509637 SPCS3P61009 180 aa11.34□□□□□ -0.59
RAB40C-202ENST00000509637 YPEL3P61236 119 aaPredicted RBP11.34□□□□□ -0.59
RAB40C-202ENST00000509637 TRIM16LQ309B1 348 aa11.34□□□□□ -0.59
RAB40C-202ENST00000509637 C2orf83Q53S99 150 aa11.34□□□□□ -0.59
RAB40C-202ENST00000509637 RNASE10Q5GAN6 216 aaKnown RBP11.34□□□□□ -0.59
RAB40C-202ENST00000509637 TERB2Q8NHR7 220 aa11.34□□□□□ -0.59
RAB40C-202ENST00000509637 NPIPB3Q92617 1050 aa11.34□□□□□ -0.59
RAB40C-202ENST00000509637 WDR12Q9GZL7 423 aaKnown RBP11.34□□□□□ -0.59
RAB40C-202ENST00000509637 MIXL1Q9H2W2 232 aa11.34□□□□□ -0.59
RAB40C-202ENST00000509637 PRR13Q9NZ81 148 aa11.34□□□□□ -0.59
RAB40C-202ENST00000509637 MED14OSP0DP75 135 aa11.33□□□□□ -0.6
RAB40C-202ENST00000509637 OR10J1P30954 320 aa11.33□□□□□ -0.6
RAB40C-202ENST00000509637 ARRDC1Q8N5I2 433 aa11.33□□□□□ -0.6
RAB40C-202ENST00000509637 OR1S2Q8NGQ3 325 aa11.33□□□□□ -0.6
RAB40C-202ENST00000509637 OR52E5Q8NH55 327 aa11.33□□□□□ -0.6
RAB40C-202ENST00000509637 TMEM222Q9H0R3 208 aa11.33□□□□□ -0.6
RAB40C-202ENST00000509637 HSPG2P98160 4391 aa11.32□□□□□ -0.6
RAB40C-202ENST00000509637 IGLV2-18A0A075B6J9 118 aa11.32□□□□□ -0.6
RAB40C-202ENST00000509637 TRAV30A0A087WSZ9 112 aa11.32□□□□□ -0.6
RAB40C-202ENST00000509637 IGKV3-20P01619 116 aa11.32□□□□□ -0.6
RAB40C-202ENST00000509637 IL4P05112 153 aa11.32□□□□□ -0.6
RAB40C-202ENST00000509637 ZNF575Q86XF7 245 aa11.32□□□□□ -0.6
RAB40C-202ENST00000509637 ZNF709Q8N972 641 aa11.32□□□□□ -0.6
RAB40C-202ENST00000509637 Q8WTZ3 238 aa11.32□□□□□ -0.6
RAB40C-202ENST00000509637 C17orf77Q96MU5 243 aa11.32□□□□□ -0.6
RAB40C-202ENST00000509637 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.32□□□□□ -0.6
RAB40C-202ENST00000509637 COPZ2Q9P299 210 aa11.32□□□□□ -0.6
RAB40C-202ENST00000509637 CACNG5Q9UF02 275 aa11.32□□□□□ -0.6
RAB40C-202ENST00000509637 IGKV1D-37A0A075B6S9 117 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 A0A087WXM4 84 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 TEX13DA0A0J9YY54 714 aaPredicted RBP11.31□□□□□ -0.6
RAB40C-202ENST00000509637 FAM25AB3EWG3 89 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 FAM25CB3EWG5 89 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 FAM25GB3EWG6 89 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 SOCS3O14543 225 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 PSG1P11464 419 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 HLA-DRB4P13762 266 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 HTR2BP41595 481 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 CTF1Q16619 201 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 LGALS9BQ3B8N2 356 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 C1orf158Q8N1D5 194 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 TMEM229BQ8NBD8 167 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 OR51G1Q8NGK1 321 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 RRNAD1Q96FB5 475 aaKnown RBP11.31□□□□□ -0.6
RAB40C-202ENST00000509637 NEU1Q99519 415 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 PDCD10Q9BUL8 212 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 ENY2Q9NPA8 101 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 NRN1Q9NPD7 142 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 HEYLQ9NQ87 328 aaPredicted RBP11.31□□□□□ -0.6
RAB40C-202ENST00000509637 EXTL2Q9UBQ6 330 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 HLA-DRB4X5D2U9 266 aa11.31□□□□□ -0.6
RAB40C-202ENST00000509637 RAB3DO95716 219 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 TOMM40O96008 361 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 PRM2P04554 102 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 P0DMU3 169 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 FAM231AP0DMU4 169 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 FAM231CP0DMU5 169 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 EMP1P54849 157 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 SCGB2B2Q4G0G5 96 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 SIGLEC15Q6ZMC9 328 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 SLC24A4Q8NFF2 622 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 ZFAND1Q8TCF1 268 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 RNASEH2CQ8TDP1 164 aaKnown RBP11.3□□□□□ -0.6
RAB40C-202ENST00000509637 NDUFAF3Q9BU61 184 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 GPR132Q9UNW8 380 aa11.3□□□□□ -0.6
RAB40C-202ENST00000509637 F6UB75 175 aa11.29□□□□□ -0.6
RAB40C-202ENST00000509637 SLC25A4P12235 298 aa11.29□□□□□ -0.6
RAB40C-202ENST00000509637 RORCP51449 518 aa11.29□□□□□ -0.6
RAB40C-202ENST00000509637 NMSQ5H8A3 153 aa11.29□□□□□ -0.6
RAB40C-202ENST00000509637 STEAP1BQ6NZ63 245 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms