RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 Q5XG85 94 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 Q8NDZ9 215 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 DNAJC9Q8WXX5 260 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 ISOC1Q96CN7 298 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 IMMP2LQ96T52 175 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 SLC25A21Q9BQT8 299 aaPredicted RBP1.13□□□□□ -2.23
XRCC4-204ENST00000509268 OR2H1Q9GZK4 316 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 YIPF3Q9GZM5 350 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 CACYBPQ9HB71 228 aaKnown RBP1.13□□□□□ -2.23
XRCC4-204ENST00000509268 SLC39A9Q9NUM3 307 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 ASF1BQ9NVP2 202 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 CKLFQ9UBR5 152 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 LAMTOR3Q9UHA4 124 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 NAT8Q9UHE5 227 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 NAT8BQ9UHF3 227 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 HIGD1AQ9Y241 93 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 R4GN34 69 aa1.13□□□□□ -2.23
XRCC4-204ENST00000509268 DOCK4Q8N1I0 1966 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 CD109Q6YHK3 1445 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 LCTP09848 1927 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 XIRP1Q702N8 1843 aaKnown RBP1.12□□□□□ -2.23
XRCC4-204ENST00000509268 SHANK3Q9BYB0 1731 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 LTBP4Q8N2S1 1624 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 A0A087X0T9 212 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 A0A0J9YW62 118 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 ARRDC5A6NEK1 342 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 TMEM212A6NML5 194 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 H3BPC8 53 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 RPL36A-HNRNPH2H7BZ11 118 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 J3QQQ9 107 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 UBFD1O14562 309 aaKnown RBP1.12□□□□□ -2.23
XRCC4-204ENST00000509268 CXCL1P09341 107 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 SCTP09683 121 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 UBBP0CG47 229 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 DEFA4P12838 97 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 COX4I1P13073 169 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 CD24P25063 80 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 SRP14P37108 136 aaKnown RBP1.12□□□□□ -2.23
XRCC4-204ENST00000509268 DNAJB13P59910 316 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 HIST1H4AP62805 103 aaKnown RBP1.12□□□□□ -2.23
XRCC4-204ENST00000509268 HIST1H1AQ02539 215 aaPredicted RBP1.12□□□□□ -2.23
XRCC4-204ENST00000509268 PLCXD2Q0VAA5 305 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 EIF3IQ13347 325 aaKnown RBP1.12□□□□□ -2.23
XRCC4-204ENST00000509268 MOBPQ13875 183 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 MORN2Q502X0 79 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 SPINT4Q6UDR6 99 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 MIR17HGQ75NE6 70 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 C3orf56Q8N813 242 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 OR5A1Q8NGJ0 315 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 PFN4Q8NHR9 129 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 FGF13Q92913 245 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 OR8B2Q96RD0 313 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 VPS25Q9BRG1 176 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 MIEN1Q9BRT3 115 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 MRPL32Q9BYC8 188 aaKnown RBP1.12□□□□□ -2.23
XRCC4-204ENST00000509268 OSTCQ9NRP0 149 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 SPANXCQ9NY87 97 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 COPZ2Q9P299 210 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 KLK12Q9UKR0 248 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 MINOS1-NBL1R4GNA1 71 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 U3KQ87 197 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 DENND4CQ5VZ89 1909 aa1.12□□□□□ -2.23
XRCC4-204ENST00000509268 MYH11P35749 1972 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 TRPM6Q9BX84 2022 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 CACNA1DQ01668 2161 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 C11orf86A6NJI1 115 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 LY6LH3BQJ8 138 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 C19orf84I3L1E1 186 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 LYZL6O75951 148 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 CDS2O95674 445 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 DBIP07108 87 aaKnown RBP1.11□□□□□ -2.23
XRCC4-204ENST00000509268 P0DMU3 169 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 FAM231AP0DMU4 169 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 FAM231CP0DMU5 169 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 KDELR1P24390 212 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 CMPK1P30085 196 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 ARPP19P56211 112 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 YPEL3P61236 119 aaPredicted RBP1.11□□□□□ -2.23
XRCC4-204ENST00000509268 UBE2BP63146 152 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 EIF5AP63241 154 aaKnown RBP1.11□□□□□ -2.23
XRCC4-204ENST00000509268 RHOGP84095 191 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 EBI3Q14213 229 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 RPL13AP3Q6NVV1 102 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 PHF5AQ7RTV0 110 aaKnown RBP1.11□□□□□ -2.23
XRCC4-204ENST00000509268 MSRB3Q8IXL7 192 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 DYNAPQ8N1N2 210 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 HIST3H2BBQ8N257 126 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 RNF182Q8N6D2 247 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 SIGLECL1Q8N7X8 197 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 OR2T10Q8NGZ9 312 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 PPTC7Q8NI37 304 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 RNASE11Q8TAA1 199 aaKnown RBP1.11□□□□□ -2.23
XRCC4-204ENST00000509268 CANT1Q8WVQ1 401 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 SCGB3A1Q96QR1 104 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 FAM215AQ9Y5M1 114 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 OVOS2A0A0G2JMS6 1433 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 CCDC171Q6TFL3 1326 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 PRR14LQ5THK1 2151 aa1.11□□□□□ -2.23
XRCC4-204ENST00000509268 MED23Q9ULK4 1368 aa1.1□□□□□ -2.23
XRCC4-204ENST00000509268 TOPBP1Q92547 1522 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms