RNA–Protein interactions for RNA: ENST00000509109.5

CCSER1-208, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 1,070 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-208ENST00000509109 TAS2R19P59542 299 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 MRPS10P82664 201 aaKnown RBP5.49□□□□□ -1.53
CCSER1-208ENST00000509109 RAB32Q13637 225 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 TRIM16LQ309B1 348 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 ZNF600Q6ZNG1 722 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 LHFPL1Q86WI0 220 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 ZFAND1Q8TCF1 268 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 GATAD1Q8WUU5 269 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 RNF183Q96D59 192 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 NARS2Q96I59 477 aaKnown RBP5.49□□□□□ -1.53
CCSER1-208ENST00000509109 RNF2Q99496 336 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 MAP6D1Q9H9H5 199 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 EXTL2Q9UBQ6 330 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 CACFD1Q9UGQ2 172 aa5.49□□□□□ -1.53
CCSER1-208ENST00000509109 TRAV2A0A0B4J234 112 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 C3orf85A0A1B0GTC6 90 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 RPS10-NUDT3A0A1W2PQS6 291 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 A0A1W2PS18 150 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 MPTX1A8MV57 137 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 DNASE2O00115 360 aaPredicted RBP5.48□□□□□ -1.53
CCSER1-208ENST00000509109 ST8SIA3O43173 380 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 DFFBO76075 338 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 GABARAPO95166 117 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 IGKV1-39P01597 117 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 IGKV1D-39P04432 117 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 ZNF182P17025 639 aaPredicted RBP5.48□□□□□ -1.53
CCSER1-208ENST00000509109 RPL35AP18077 110 aaKnown RBP5.48□□□□□ -1.53
CCSER1-208ENST00000509109 OPRK1P41145 380 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 EIF2B2P49770 351 aaKnown RBP5.48□□□□□ -1.53
CCSER1-208ENST00000509109 PPP5CP53041 499 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 SSBP1Q04837 148 aaKnown RBP5.48□□□□□ -1.53
CCSER1-208ENST00000509109 MEF2DQ14814 521 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 FAM219AQ8IW50 185 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 MFFQ9GZY8 342 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 CSTL1Q9H114 145 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 MTFP1Q9UDX5 166 aa5.48□□□□□ -1.53
CCSER1-208ENST00000509109 C14orf166Q9Y224 244 aaKnown RBP5.48□□□□□ -1.53
CCSER1-208ENST00000509109 FRAS1Q86XX4 4008 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 PIGBOS1A0A0B4J2F0 54 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 GABARAPH6UMI1 98 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 RGS5O15539 181 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 RAB3DO95716 219 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 IGKV1-5P01602 117 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 CD3DP04234 171 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 UCP1P25874 307 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 TFPI2P48307 235 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 SURF2Q15527 256 aaPredicted RBP5.47□□□□□ -1.53
CCSER1-208ENST00000509109 SCGB2B2Q4G0G5 96 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 TMEM41BQ5BJD5 291 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 RNASE12Q5GAN4 147 aaKnown RBP5.47□□□□□ -1.53
CCSER1-208ENST00000509109 CEMP1Q6PRD7 247 aaPredicted RBP5.47□□□□□ -1.53
CCSER1-208ENST00000509109 TOMM20LQ6UXN7 152 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 TCF24Q7RTU0 167 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 APRG1Q8IVJ8 170 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 TMEM229BQ8NBD8 167 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 OR13C8Q8NGS7 320 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 OR52I2Q8NH67 350 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 TERB2Q8NHR7 220 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 GRAMD2BQ96HH9 432 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 METTL26Q96S19 204 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 TP53RKQ96S44 253 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 ABHD1Q96SE0 405 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 C11orf68Q9H3H3 251 aaKnown RBP5.47□□□□□ -1.53
CCSER1-208ENST00000509109 RABL2AQ9UBK7 228 aaPredicted RBP5.47□□□□□ -1.53
CCSER1-208ENST00000509109 KLK11Q9UBX7 282 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 RABL2BQ9UNT1 228 aa5.47□□□□□ -1.53
CCSER1-208ENST00000509109 PUS1Q9Y606 427 aaKnown RBP eCLIP5.47□□□□□ -1.53
CCSER1-208ENST00000509109 IGKV3-7A0A075B6H7 116 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 TRAV30A0A087WSZ9 112 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 A0A087WWL8 130 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 IGHV3-49A0A0A0MS15 119 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 TEX13DA0A0J9YY54 714 aaPredicted RBP5.46□□□□□ -1.54
CCSER1-208ENST00000509109 DISC1C4P0D8 188 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 CLN5O75503 358 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 LY6G6CO95867 125 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 CA1P00915 261 aaPredicted RBP5.46□□□□□ -1.54
CCSER1-208ENST00000509109 IGHV3-48P01763 117 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 CD74P04233 296 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 NPSP0C0P6 89 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 P0C879 139 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 NPPCP23582 126 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 HTR2BP41595 481 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 RPL5P46777 297 aaKnown RBP5.46□□□□□ -1.54
CCSER1-208ENST00000509109 SPCS3P61009 180 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 KLF9Q13886 244 aaPredicted RBP5.46□□□□□ -1.54
CCSER1-208ENST00000509109 CTF1Q16619 201 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 SPINK9Q5DT21 86 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 GPR107Q5VW38 600 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 FAM90A2PQ658T7 463 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 STEAP1BQ6NZ63 245 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 NOXA1Q86UR1 476 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 STHQ8IWL8 128 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 CENPSQ8N2Z9 138 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 GBGT1Q8N5D6 347 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 OR4X1Q8NH49 305 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 RBPMSQ93062 196 aaKnown RBP5.46□□□□□ -1.54
CCSER1-208ENST00000509109 PRRT1Q99946 306 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 RARRES2Q99969 163 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 TMEM222Q9H0R3 208 aa5.46□□□□□ -1.54
CCSER1-208ENST00000509109 MS4A6AQ9H2W1 248 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms