RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 SPART-AS1P0CW21 52 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 HOXA1P49639 335 aaPredicted RBP11.41□□□□□ -0.58
CXCL1-202ENST00000509101 TMBIM6P55061 237 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 MLANAQ16655 118 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 LPCAT3Q6P1A2 487 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 LYSMD2Q8IV50 215 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 OR4X1Q8NH49 305 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 DYNC2LI1Q8TCX1 351 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 RAB2BQ8WUD1 216 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 GLMPQ8WWB7 406 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 AP3S1Q92572 193 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 SMIM31A0A1B0GVY4 71 aa11.4□□□□□ -0.58
CXCL1-202ENST00000509101 FAM90A26D6RGX4 464 aa11.4□□□□□ -0.58
CXCL1-202ENST00000509101 INS-IGF2F8WCM5 200 aa11.4□□□□□ -0.58
CXCL1-202ENST00000509101 CTDSP2O14595 271 aa11.4□□□□□ -0.58
CXCL1-202ENST00000509101 IGKV1-17P01599 117 aa11.4□□□□□ -0.58
CXCL1-202ENST00000509101 IGKV1-5P01602 117 aa11.4□□□□□ -0.58
CXCL1-202ENST00000509101 AKR1C2P52895 323 aa11.4□□□□□ -0.58
CXCL1-202ENST00000509101 SUB1P53999 127 aaKnown RBP eCLIP11.4□□□□□ -0.58
CXCL1-202ENST00000509101 SNRPD3P62318 126 aaKnown RBP11.4□□□□□ -0.58
CXCL1-202ENST00000509101 RNASE12Q5GAN4 147 aaKnown RBP11.4□□□□□ -0.58
CXCL1-202ENST00000509101 C1orf134Q5TEV5 83 aa11.4□□□□□ -0.58
CXCL1-202ENST00000509101 C16orf54Q6UWD8 224 aa11.4□□□□□ -0.58
CXCL1-202ENST00000509101 PDCD10Q9BUL8 212 aa11.4□□□□□ -0.58
CXCL1-202ENST00000509101 EXTL2Q9UBQ6 330 aa11.4□□□□□ -0.58
CXCL1-202ENST00000509101 IGHV3OR16-12A0A075B7B8 117 aa11.39□□□□□ -0.59
CXCL1-202ENST00000509101 A0A0B4J293 547 aa11.39□□□□□ -0.59
CXCL1-202ENST00000509101 H3BMM0 161 aa11.39□□□□□ -0.59
CXCL1-202ENST00000509101 H3BMQ9 156 aa11.39□□□□□ -0.59
CXCL1-202ENST00000509101 HNRNPCP07910 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
CXCL1-202ENST00000509101 HTN3P15516 51 aa11.39□□□□□ -0.59
CXCL1-202ENST00000509101 ZNF705AQ6ZN79 300 aaPredicted RBP11.39□□□□□ -0.59
CXCL1-202ENST00000509101 MAPKAPK5-AS1Q8N8E1 139 aa11.39□□□□□ -0.59
CXCL1-202ENST00000509101 FAM210BQ96KR6 192 aa11.39□□□□□ -0.59
CXCL1-202ENST00000509101 NEU1Q99519 415 aa11.39□□□□□ -0.59
CXCL1-202ENST00000509101 U3KQE9 123 aa11.39□□□□□ -0.59
CXCL1-202ENST00000509101 TMEM189A5PLL7 270 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 ZNF705FA8MVS1 300 aaPredicted RBP11.38□□□□□ -0.59
CXCL1-202ENST00000509101 C16orf90A8MZG2 172 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 P0C879 139 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 ZNF705DP0CH99 300 aaPredicted RBP11.38□□□□□ -0.59
CXCL1-202ENST00000509101 ZNF705BP0CI00 300 aaPredicted RBP11.38□□□□□ -0.59
CXCL1-202ENST00000509101 HLA-DRB4P13762 266 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 ETV6P41212 452 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 FXYD7P58549 80 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 RNF212Q495C1 297 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 ABHD1Q96SE0 405 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 BCL7BQ9BQE9 202 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 ENY2Q9NPA8 101 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 NRN1Q9NPD7 142 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 HLA-DRB4X5D2U9 266 aa11.38□□□□□ -0.59
CXCL1-202ENST00000509101 APOBP04114 4563 aaKnown RBP11.37□□□□□ -0.59
CXCL1-202ENST00000509101 IGKV3-20P01619 116 aa11.37□□□□□ -0.59
CXCL1-202ENST00000509101 AP2S1P53680 142 aaPredicted RBP11.37□□□□□ -0.59
CXCL1-202ENST00000509101 UCP3P55916 312 aa11.37□□□□□ -0.59
CXCL1-202ENST00000509101 FAM222AQ5U5X8 452 aa11.37□□□□□ -0.59
CXCL1-202ENST00000509101 OR52I2Q8NH67 350 aa11.37□□□□□ -0.59
CXCL1-202ENST00000509101 NIPSNAP3BQ9BS92 247 aa11.37□□□□□ -0.59
CXCL1-202ENST00000509101 SCPEP1Q9HB40 452 aa11.37□□□□□ -0.59
CXCL1-202ENST00000509101 DKK2Q9UBU2 259 aa11.37□□□□□ -0.59
CXCL1-202ENST00000509101 KLK11Q9UBX7 282 aa11.37□□□□□ -0.59
CXCL1-202ENST00000509101 RFNGQ9Y644 331 aa11.37□□□□□ -0.59
CXCL1-202ENST00000509101 TRAV30A0A087WSZ9 112 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 TEX48A0A1B0GUV7 120 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 RGS5O15539 181 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 CDK2AP2O75956 126 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 IGLC1P0CG04 106 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 PGAM2P15259 253 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 PI3P19957 117 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 RND2P52198 227 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 DEFB1P60022 68 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 TNP2Q05952 138 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 USF2Q15853 346 aaPredicted RBP11.36□□□□□ -0.59
CXCL1-202ENST00000509101 GDF5OSQ5U4N7 250 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 OR1S2Q8NGQ3 325 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 TP53RKQ96S44 253 aa11.36□□□□□ -0.59
CXCL1-202ENST00000509101 SLIRPQ9GZT3 109 aaKnown RBP11.36□□□□□ -0.59
CXCL1-202ENST00000509101 CCDC59Q9P031 241 aaKnown RBP11.36□□□□□ -0.59
CXCL1-202ENST00000509101 RPS10-NUDT3A0A1W2PQS6 291 aa11.35□□□□□ -0.59
CXCL1-202ENST00000509101 SMIM9A6NGZ8 99 aa11.35□□□□□ -0.59
CXCL1-202ENST00000509101 M0QYG6 137 aa11.35□□□□□ -0.59
CXCL1-202ENST00000509101 IL4P05112 153 aa11.35□□□□□ -0.59
CXCL1-202ENST00000509101 OR10J1P30954 320 aa11.35□□□□□ -0.59
CXCL1-202ENST00000509101 RCVRNP35243 200 aa11.35□□□□□ -0.59
CXCL1-202ENST00000509101 DHODHQ02127 395 aa11.35□□□□□ -0.59
CXCL1-202ENST00000509101 BSXQ3C1V8 233 aa11.35□□□□□ -0.59
CXCL1-202ENST00000509101 TMEM88Q6PEY1 159 aa11.35□□□□□ -0.59
CXCL1-202ENST00000509101 SIGLEC15Q6ZMC9 328 aa11.35□□□□□ -0.59
CXCL1-202ENST00000509101 Q8WTZ3 238 aa11.35□□□□□ -0.59
CXCL1-202ENST00000509101 A0A0G2JRQ6 117 aa11.34□□□□□ -0.59
CXCL1-202ENST00000509101 NOL3O60936 208 aaKnown RBP11.34□□□□□ -0.59
CXCL1-202ENST00000509101 RND3P61587 244 aa11.34□□□□□ -0.59
CXCL1-202ENST00000509101 PRSS54Q6PEW0 395 aa11.34□□□□□ -0.59
CXCL1-202ENST00000509101 RNASE11Q8TAA1 199 aaKnown RBP11.34□□□□□ -0.59
CXCL1-202ENST00000509101 RBM38Q9H0Z9 239 aaKnown RBP11.34□□□□□ -0.59
CXCL1-202ENST00000509101 SEPSECSQ9HD40 501 aaKnown RBP11.34□□□□□ -0.59
CXCL1-202ENST00000509101 DNAH5Q8TE73 4624 aa11.33□□□□□ -0.6
CXCL1-202ENST00000509101 ATG12O94817 140 aa11.33□□□□□ -0.6
CXCL1-202ENST00000509101 NKX2-1P43699 371 aaPredicted RBP11.33□□□□□ -0.6
CXCL1-202ENST00000509101 PIGPP57054 158 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms