RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 GABARAPH6UMI1 98 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 K7ERU9 68 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 NDUFB3O43676 98 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 TSPAN19P0C672 248 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 INAFM2P0DMQ5 153 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 COX6A1P12074 109 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 RPL7P18124 248 aaKnown RBP1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 HLA-DMBP28068 263 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 RPL35P42766 123 aaKnown RBP1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 ZNF80P51504 273 aaPredicted RBP1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 NCS1P62166 190 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 SELENOWP63302 87 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 VMA21Q3ZAQ7 101 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 LINC01554Q52M75 96 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 LINC00483Q53H64 154 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 KHDC3LQ587J8 217 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 ZNF660Q6AZW8 331 aaPredicted RBP1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 Q6ZS52 159 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 DEFB128Q7Z7B8 93 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 LHFPL1Q86WI0 220 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 BPIFA4PQ86YQ2 179 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 ZNF695Q8IW36 515 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 DYNAPQ8N1N2 210 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 RPP25LQ8N5L8 163 aaKnown RBP1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 SIGLECL1Q8N7X8 197 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 TSTD1Q8NFU3 115 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 OR52R1Q8NGF1 315 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 OR2T10Q8NGZ9 312 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 TERB2Q8NHR7 220 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 MRPS24Q96EL2 167 aaKnown RBP1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 ZNF714Q96N38 554 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 NAT8Q9UHE5 227 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 NAT8BQ9UHF3 227 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 HIGD1AQ9Y241 93 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 HS3ST2Q9Y278 367 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 OVOS2A0A0G2JMS6 1433 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 RIC1Q4ADV7 1423 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 MYH3P11055 1940 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 MYH2Q9UKX2 1941 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 PLXNB3Q9ULL4 1909 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 DSCAML1Q8TD84 2053 aa1.46□□□□□ -2.18
DEPDC1B-204ENST00000509006 TOPBP1Q92547 1522 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 DOCK3Q8IZD9 2030 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 CHD5Q8TDI0 1954 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 UBR2Q8IWV8 1755 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 TRGV5A0A0B4J1U4 118 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 IGHV1-58A0A0C4DH39 117 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 TRBV7-6A0A0J9YX20 115 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 GGTLC3B5MD39 225 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 M0R378 163 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 SDCBPO00560 298 aaPredicted RBP1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 OR2T1O43869 369 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 TNFSF15O95150 251 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 HTR1AP08908 422 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 PAEPP09466 180 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 P0DMU3 169 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 FAM231AP0DMU4 169 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 FAM231CP0DMU5 169 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 FABP2P12104 132 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 HLA-EP13747 358 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 RPS3P23396 243 aaKnown RBP eCLIP1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 FUSP35637 526 aaKnown RBP eCLIP1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 EIF2B2P49770 351 aaKnown RBP1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 DYNLT3P51808 116 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 HBBP68871 147 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 MRPS10P82664 201 aaKnown RBP1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 C4orf22Q6V702 233 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 LINC00305Q7Z4B0 112 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 SLC35E3Q7Z769 313 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 LINC00471Q8N535 108 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 OR4E2Q8NGC2 313 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 OR4B1Q8NGF8 309 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 OR51A4Q8NGJ6 313 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 OR4K15Q8NH41 348 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 CMTM2Q8TAZ6 248 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 RNASE6Q93091 150 aaKnown RBP1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 ARL11Q969Q4 196 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 TCEAL7Q9BRU2 100 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 NPCDR1Q9BY65 106 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 MRPL32Q9BYC8 188 aaKnown RBP1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 OR8D2Q9GZM6 311 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 KLK12Q9UKR0 248 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 ZNF443Q9Y2A4 671 aaPredicted RBP1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 FAM215AQ9Y5M1 114 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 U3KQ87 197 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 SVILO95425 2214 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 OVOS2A0A0J9YW53 1432 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 DISP2A7MBM2 1401 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 OVOS2Q6IE36 1432 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 CD109Q6YHK3 1445 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 TRAPPC8Q9Y2L5 1435 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 CDC42BPBQ9Y5S2 1711 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 RALGAPA2Q2PPJ7 1873 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 SCN1AP35498 2009 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 ROCK2O75116 1388 aaKnown RBP1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 ARHGEF11O15085 1522 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 ARHGAP21Q5T5U3 1957 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 SCN10AQ9Y5Y9 1956 aa1.45□□□□□ -2.18
DEPDC1B-204ENST00000509006 LTBP4Q8N2S1 1624 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms