RNA–Protein interactions for RNA: ENST00000508190.1

HOXC9-203, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 3 BASIC

Gene HOXC9, Length 1,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-203ENST00000508190 BMPR1BO00238 502 aa16.03■□□□□ 0.16
HOXC9-203ENST00000508190 TGOLN2O43493 480 aa16.03■□□□□ 0.16
HOXC9-203ENST00000508190 ADMP35318 185 aa16.03■□□□□ 0.16
HOXC9-203ENST00000508190 VWC2Q2TAL6 325 aa16.03■□□□□ 0.16
HOXC9-203ENST00000508190 RAX2Q96IS3 184 aa16.03■□□□□ 0.16
HOXC9-203ENST00000508190 UQCC1Q9NVA1 299 aa16.03■□□□□ 0.16
HOXC9-203ENST00000508190 IGKV1D-37A0A075B6S9 117 aa16.02■□□□□ 0.15
HOXC9-203ENST00000508190 FNDC10F2Z333 226 aa16.02■□□□□ 0.15
HOXC9-203ENST00000508190 CTSGP08311 255 aa16.02■□□□□ 0.15
HOXC9-203ENST00000508190 OR10J1P30954 320 aa16.02■□□□□ 0.15
HOXC9-203ENST00000508190 TIGITQ495A1 244 aa16.02■□□□□ 0.15
HOXC9-203ENST00000508190 TREML4Q6UXN2 200 aa16.02■□□□□ 0.15
HOXC9-203ENST00000508190 OR11H1Q8NG94 326 aa16.02■□□□□ 0.15
HOXC9-203ENST00000508190 HYLS1Q96M11 299 aa16.02■□□□□ 0.15
HOXC9-203ENST00000508190 IGHV3-35A0A0C4DH35 117 aa16.01■□□□□ 0.15
HOXC9-203ENST00000508190 IGLC1P0CG04 106 aa16.01■□□□□ 0.15
HOXC9-203ENST00000508190 NKX2-5P52952 324 aaPredicted RBP16.01■□□□□ 0.15
HOXC9-203ENST00000508190 ATP6V1FQ16864 119 aa16.01■□□□□ 0.15
HOXC9-203ENST00000508190 TMEM144Q7Z5S9 345 aa16.01■□□□□ 0.15
HOXC9-203ENST00000508190 ATP6V0BQ99437 205 aa16.01■□□□□ 0.15
HOXC9-203ENST00000508190 ATP5SQ99766 215 aa16.01■□□□□ 0.15
HOXC9-203ENST00000508190 NPVFQ9HCQ7 196 aa16.01■□□□□ 0.15
HOXC9-203ENST00000508190 ZFP92A6NM28 416 aa16■□□□□ 0.15
HOXC9-203ENST00000508190 IGKV1-17P01599 117 aa16■□□□□ 0.15
HOXC9-203ENST00000508190 HSPB1P04792 205 aaKnown RBP16■□□□□ 0.15
HOXC9-203ENST00000508190 OR2F1Q13607 317 aa16■□□□□ 0.15
HOXC9-203ENST00000508190 ZNF345Q14585 488 aa16■□□□□ 0.15
HOXC9-203ENST00000508190 THAP8Q8NA92 274 aa16■□□□□ 0.15
HOXC9-203ENST00000508190 OR1N2Q8NGR9 330 aa16■□□□□ 0.15
HOXC9-203ENST00000508190 ZNF414Q96IQ9 312 aa16■□□□□ 0.15
HOXC9-203ENST00000508190 GAR1Q9NY12 217 aaKnown RBP16■□□□□ 0.15
HOXC9-203ENST00000508190 NUPL2O15504 423 aaKnown RBP15.99■□□□□ 0.15
HOXC9-203ENST00000508190 FAM209BQ5JX69 171 aa15.99■□□□□ 0.15
HOXC9-203ENST00000508190 SHISA2Q6UWI4 295 aa15.99■□□□□ 0.15
HOXC9-203ENST00000508190 KCNRGQ8N5I3 272 aa15.99■□□□□ 0.15
HOXC9-203ENST00000508190 WDR83OSQ9Y284 106 aa15.99■□□□□ 0.15
HOXC9-203ENST00000508190 BOLA2-SMG1P6H3BVE0 249 aa15.99■□□□□ 0.15
HOXC9-203ENST00000508190 CCL24O00175 119 aa15.99■□□□□ 0.15
HOXC9-203ENST00000508190 OR2C1O95371 312 aa15.99■□□□□ 0.15
HOXC9-203ENST00000508190 SLURP1P55000 103 aa15.99■□□□□ 0.15
HOXC9-203ENST00000508190 ZNF90Q03938 601 aa15.99■□□□□ 0.15
HOXC9-203ENST00000508190 LGALSLQ3ZCW2 172 aaPredicted RBP15.99■□□□□ 0.15
HOXC9-203ENST00000508190 SPSB3Q6PJ21 355 aa15.99■□□□□ 0.15
HOXC9-203ENST00000508190 LSM4Q9Y4Z0 139 aaKnown RBP15.99■□□□□ 0.15
HOXC9-203ENST00000508190 TRAV30A0A087WSZ9 112 aa15.98■□□□□ 0.15
HOXC9-203ENST00000508190 LINC01619G3V211 115 aa15.98■□□□□ 0.15
HOXC9-203ENST00000508190 GGCTO75223 188 aaKnown RBP15.98■□□□□ 0.15
HOXC9-203ENST00000508190 DFFBO76075 338 aa15.98■□□□□ 0.15
HOXC9-203ENST00000508190 FGF7P21781 194 aa15.98■□□□□ 0.15
HOXC9-203ENST00000508190 ZNF616Q08AN1 781 aa15.98■□□□□ 0.15
HOXC9-203ENST00000508190 TEPPQ6URK8 271 aa15.98■□□□□ 0.15
HOXC9-203ENST00000508190 DPF1Q92782 380 aa15.98■□□□□ 0.15
HOXC9-203ENST00000508190 MGST2Q99735 147 aa15.98■□□□□ 0.15
HOXC9-203ENST00000508190 HOXD3P31249 432 aaPredicted RBP15.97■□□□□ 0.15
HOXC9-203ENST00000508190 FHL3Q13643 280 aa15.97■□□□□ 0.15
HOXC9-203ENST00000508190 RPEL1Q2QD12 228 aa15.97■□□□□ 0.15
HOXC9-203ENST00000508190 BTNL8Q6UX41 500 aa15.97■□□□□ 0.15
HOXC9-203ENST00000508190 C9orf62Q8N4C0 152 aa15.97■□□□□ 0.15
HOXC9-203ENST00000508190 TRGV9Q99603 122 aa15.97■□□□□ 0.15
HOXC9-203ENST00000508190 ARL6Q9H0F7 186 aa15.97■□□□□ 0.15
HOXC9-203ENST00000508190 A0A0D9SG52 128 aa15.96■□□□□ 0.15
HOXC9-203ENST00000508190 TMEM182Q6ZP80 229 aaPredicted RBP15.96■□□□□ 0.15
HOXC9-203ENST00000508190 TMUB2Q71RG4 321 aa15.96■□□□□ 0.15
HOXC9-203ENST00000508190 WDR61Q9GZS3 305 aaKnown RBP15.96■□□□□ 0.15
HOXC9-203ENST00000508190 IGHV3OR16-8A0A075B7F1 116 aa15.95■□□□□ 0.14
HOXC9-203ENST00000508190 AGPAT2O15120 278 aa15.95■□□□□ 0.14
HOXC9-203ENST00000508190 SCGB2A1O75556 95 aa15.95■□□□□ 0.14
HOXC9-203ENST00000508190 GATA2P23769 480 aaPredicted RBP15.95■□□□□ 0.14
HOXC9-203ENST00000508190 RPL7L1Q6DKI1 246 aaKnown RBP15.95■□□□□ 0.14
HOXC9-203ENST00000508190 LAMTOR1Q6IAA8 161 aa15.95■□□□□ 0.14
HOXC9-203ENST00000508190 ARPC5LQ9BPX5 153 aa15.95■□□□□ 0.14
HOXC9-203ENST00000508190 CYTL1Q9NRR1 136 aa15.95■□□□□ 0.14
HOXC9-203ENST00000508190 IFNA5P01569 189 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 ZP3P21754 424 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 YPEL3P61236 119 aaPredicted RBP15.94■□□□□ 0.14
HOXC9-203ENST00000508190 KRTAP21-3Q3LHN1 58 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 ZNF600Q6ZNG1 722 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 CYP2G1PQ6ZSU1 146 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 RCC1LQ96I51 464 aaKnown RBP15.94■□□□□ 0.14
HOXC9-203ENST00000508190 GGTLC1Q9BX51 225 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 PUS1Q9Y606 427 aaKnown RBP eCLIP15.94■□□□□ 0.14
HOXC9-203ENST00000508190 BCL2L11O43521 198 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 TSPAN15O95858 294 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 TOMM40O96008 361 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 PSG1P11464 419 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 MYCNOSP40205 109 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 RELQ04864 619 aaPredicted RBP15.94■□□□□ 0.14
HOXC9-203ENST00000508190 UNQ9165/PRO28630Q6UXU0 137 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 OR4F17Q8NGA8 305 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 OR4F4Q96R69 305 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 NPCDR1Q9BY65 106 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 RFNGQ9Y644 331 aa15.94■□□□□ 0.14
HOXC9-203ENST00000508190 KANTRA0A1W2PQU2 76 aa15.93■□□□□ 0.14
HOXC9-203ENST00000508190 PF4P02776 101 aa15.93■□□□□ 0.14
HOXC9-203ENST00000508190 RD3LP0DJH9 198 aa15.93■□□□□ 0.14
HOXC9-203ENST00000508190 CAMLGP49069 296 aa15.93■□□□□ 0.14
HOXC9-203ENST00000508190 SYNJ2BPP57105 145 aa15.93■□□□□ 0.14
HOXC9-203ENST00000508190 ZNF266Q14584 549 aa15.93■□□□□ 0.14
HOXC9-203ENST00000508190 DLX4Q92988 240 aaPredicted RBP15.93■□□□□ 0.14
HOXC9-203ENST00000508190 RSG1Q9BU20 258 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms