RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 SEPSECSQ9HD40 501 aaKnown RBP12.83□□□□□ -0.36
CLDND1-217ENST00000508071 NRN1Q9NPD7 142 aa12.83□□□□□ -0.36
CLDND1-217ENST00000508071 TEX48A0A1B0GUV7 120 aa12.82□□□□□ -0.36
CLDND1-217ENST00000508071 HLA-DRB4P13762 266 aa12.82□□□□□ -0.36
CLDND1-217ENST00000508071 RND3P61587 244 aa12.82□□□□□ -0.36
CLDND1-217ENST00000508071 ZNF705AQ6ZN79 300 aaPredicted RBP12.82□□□□□ -0.36
CLDND1-217ENST00000508071 RFNGQ9Y644 331 aa12.82□□□□□ -0.36
CLDND1-217ENST00000508071 HLA-DRB4X5D2U9 266 aa12.82□□□□□ -0.36
CLDND1-217ENST00000508071 NACAE9PAV3 2078 aa12.82□□□□□ -0.36
CLDND1-217ENST00000508071 IGHV3OR16-12A0A075B7B8 117 aa12.81□□□□□ -0.36
CLDND1-217ENST00000508071 ZNF705FA8MVS1 300 aaPredicted RBP12.81□□□□□ -0.36
CLDND1-217ENST00000508071 ZNF705DP0CH99 300 aaPredicted RBP12.81□□□□□ -0.36
CLDND1-217ENST00000508071 ZNF705BP0CI00 300 aaPredicted RBP12.81□□□□□ -0.36
CLDND1-217ENST00000508071 RCVRNP35243 200 aa12.81□□□□□ -0.36
CLDND1-217ENST00000508071 NEDD8Q15843 81 aa12.81□□□□□ -0.36
CLDND1-217ENST00000508071 ZNF486Q96H40 463 aaPredicted RBP12.81□□□□□ -0.36
CLDND1-217ENST00000508071 TP53RKQ96S44 253 aa12.81□□□□□ -0.36
CLDND1-217ENST00000508071 NIPSNAP3BQ9BS92 247 aa12.81□□□□□ -0.36
CLDND1-217ENST00000508071 SCPEP1Q9HB40 452 aa12.81□□□□□ -0.36
CLDND1-217ENST00000508071 LRP1BQ9NZR2 4599 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 SMIM31A0A1B0GVY4 71 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 IGLC1P0CG04 106 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 HTN3P15516 51 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 PI3P19957 117 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 OR10J1P30954 320 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 TGFBR1P36897 503 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 RPS19P39019 145 aaKnown RBP12.8□□□□□ -0.36
CLDND1-217ENST00000508071 HTR2BP41595 481 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 RND2P52198 227 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 PIGPP57054 158 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 YPEL3P61236 119 aaPredicted RBP12.8□□□□□ -0.36
CLDND1-217ENST00000508071 DHODHQ02127 395 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 TRIM16LQ309B1 348 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 BSXQ3C1V8 233 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 SIGLEC15Q6ZMC9 328 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 RNASE11Q8TAA1 199 aaKnown RBP12.8□□□□□ -0.36
CLDND1-217ENST00000508071 RRNAD1Q96FB5 475 aaKnown RBP12.8□□□□□ -0.36
CLDND1-217ENST00000508071 Q9H521 79 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 DKK2Q9UBU2 259 aa12.8□□□□□ -0.36
CLDND1-217ENST00000508071 C3orf85A0A1B0GTC6 90 aa12.79□□□□□ -0.36
CLDND1-217ENST00000508071 M0QYG6 137 aa12.79□□□□□ -0.36
CLDND1-217ENST00000508071 GSTZ1O43708 216 aaPredicted RBP12.79□□□□□ -0.36
CLDND1-217ENST00000508071 IGKV3-20P01619 116 aa12.79□□□□□ -0.36
CLDND1-217ENST00000508071 IL4P05112 153 aa12.79□□□□□ -0.36
CLDND1-217ENST00000508071 NKX2-1P43699 371 aaPredicted RBP12.79□□□□□ -0.36
CLDND1-217ENST00000508071 FXYD7P58549 80 aa12.79□□□□□ -0.36
CLDND1-217ENST00000508071 USF2Q15853 346 aaPredicted RBP12.79□□□□□ -0.36
CLDND1-217ENST00000508071 FAM222AQ5U5X8 452 aa12.79□□□□□ -0.36
CLDND1-217ENST00000508071 PRSS54Q6PEW0 395 aa12.79□□□□□ -0.36
CLDND1-217ENST00000508071 SNX29P2Q8IUI4 249 aa12.79□□□□□ -0.36
CLDND1-217ENST00000508071 C16orf90A8MZG2 172 aa12.78□□□□□ -0.36
CLDND1-217ENST00000508071 SLC25A4P12235 298 aa12.78□□□□□ -0.36
CLDND1-217ENST00000508071 SPCS3P61009 180 aa12.78□□□□□ -0.36
CLDND1-217ENST00000508071 BUB3O43684 328 aa12.77□□□□□ -0.37
CLDND1-217ENST00000508071 CDK2AP2O75956 126 aa12.77□□□□□ -0.37
CLDND1-217ENST00000508071 OXA1LQ15070 435 aa12.77□□□□□ -0.37
CLDND1-217ENST00000508071 GDF5OSQ5U4N7 250 aa12.77□□□□□ -0.37
CLDND1-217ENST00000508071 RNASEH2CQ8TDP1 164 aaKnown RBP12.77□□□□□ -0.37
CLDND1-217ENST00000508071 HEYLQ9NQ87 328 aaPredicted RBP12.77□□□□□ -0.37
CLDND1-217ENST00000508071 COPZ2Q9P299 210 aa12.77□□□□□ -0.37
CLDND1-217ENST00000508071 TMED3Q9Y3Q3 217 aa12.77□□□□□ -0.37
CLDND1-217ENST00000508071 A0A0G2JRQ6 117 aa12.76□□□□□ -0.37
CLDND1-217ENST00000508071 RD3LP0DJH9 198 aa12.76□□□□□ -0.37
CLDND1-217ENST00000508071 SP6Q3SY56 376 aa12.76□□□□□ -0.37
CLDND1-217ENST00000508071 TMEM88Q6PEY1 159 aa12.76□□□□□ -0.37
CLDND1-217ENST00000508071 MAPKAPK5-AS1Q8N8E1 139 aa12.76□□□□□ -0.37
CLDND1-217ENST00000508071 COMMD3Q9UBI1 195 aa12.76□□□□□ -0.37
CLDND1-217ENST00000508071 APOA1P02647 267 aa12.75□□□□□ -0.37
CLDND1-217ENST00000508071 FAM3BP58499 235 aaPredicted RBP12.75□□□□□ -0.37
CLDND1-217ENST00000508071 LSM3P62310 102 aaKnown RBP12.75□□□□□ -0.37
CLDND1-217ENST00000508071 C2orf83Q53S99 150 aa12.75□□□□□ -0.37
CLDND1-217ENST00000508071 RNASE10Q5GAN6 216 aaKnown RBP12.75□□□□□ -0.37
CLDND1-217ENST00000508071 ETFRF1Q6IPR1 90 aa12.75□□□□□ -0.37
CLDND1-217ENST00000508071 FOXI2Q6ZQN5 318 aa12.75□□□□□ -0.37
CLDND1-217ENST00000508071 CCDC71LQ8N9Z2 235 aa12.75□□□□□ -0.37
CLDND1-217ENST00000508071 OR4B1Q8NGF8 309 aa12.75□□□□□ -0.37
CLDND1-217ENST00000508071 OR52E5Q8NH55 327 aa12.75□□□□□ -0.37
CLDND1-217ENST00000508071 LINC00052Q96N35 136 aa12.75□□□□□ -0.37
CLDND1-217ENST00000508071 C7orf50Q9BRJ6 194 aaKnown RBP12.75□□□□□ -0.37
CLDND1-217ENST00000508071 SAV1Q9H4B6 383 aaPredicted RBP12.75□□□□□ -0.37
CLDND1-217ENST00000508071 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.75□□□□□ -0.37
CLDND1-217ENST00000508071 GOLT1BQ9Y3E0 138 aa12.75□□□□□ -0.37
CLDND1-217ENST00000508071 TOMM40O96008 361 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 HBE1P02100 147 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 UCP1P25874 307 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 NUP62P37198 522 aaPredicted RBP12.74□□□□□ -0.37
CLDND1-217ENST00000508071 ID1P41134 155 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 DEFB1P60022 68 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 LHFPL1Q86WI0 220 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 FAM219AQ8IW50 185 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 SLC24A4Q8NFF2 622 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 ZFAND1Q8TCF1 268 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 NPIPB3Q92617 1050 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 ACY3Q96HD9 319 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 PFDN2Q9UHV9 154 aa12.74□□□□□ -0.37
CLDND1-217ENST00000508071 LOC102723971A0A1B0GUV8 181 aa12.73□□□□□ -0.37
CLDND1-217ENST00000508071 CEBPZOSA8MTT3 80 aa12.73□□□□□ -0.37
CLDND1-217ENST00000508071 B3GALNT1O75752 331 aa12.73□□□□□ -0.37
CLDND1-217ENST00000508071 DAD1P61803 113 aa12.73□□□□□ -0.37
CLDND1-217ENST00000508071 TNP2Q05952 138 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms