RNA–Protein interactions for RNA: ENST00000508017.5

SNCAIP-209, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-209ENST00000508017 ST6GALNAC6Q969X2 333 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 FXYD5Q96DB9 178 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 HARBI1Q96MB7 349 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 NCOR1P1Q9H4R4 102 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 C7orf69Q9H7B7 122 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 SAP30LQ9HAJ7 183 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 MRPS16Q9Y3D3 137 aaKnown RBP10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 DYSFO75923 2080 aa10.86□□□□□ -0.67
SNCAIP-209ENST00000508017 SEM1Q6ZVN7 128 aa10.85□□□□□ -0.67
SNCAIP-209ENST00000508017 TCF24Q7RTU0 167 aa10.85□□□□□ -0.67
SNCAIP-209ENST00000508017 RNF7Q9UBF6 113 aa10.85□□□□□ -0.67
SNCAIP-209ENST00000508017 IGKV1D-37A0A075B6S9 117 aa10.85□□□□□ -0.67
SNCAIP-209ENST00000508017 CGB1A6NKQ9 187 aa10.85□□□□□ -0.67
SNCAIP-209ENST00000508017 H0YJW9 148 aa10.85□□□□□ -0.67
SNCAIP-209ENST00000508017 FSTL3O95633 263 aa10.85□□□□□ -0.67
SNCAIP-209ENST00000508017 WT1-ASQ06250 92 aa10.85□□□□□ -0.67
SNCAIP-209ENST00000508017 OR2D3Q8NGH3 330 aa10.85□□□□□ -0.67
SNCAIP-209ENST00000508017 RPH3ALQ9UNE2 315 aa10.85□□□□□ -0.67
SNCAIP-209ENST00000508017 COX11Q9Y6N1 276 aa10.85□□□□□ -0.67
SNCAIP-209ENST00000508017 OR2J3O76001 311 aa10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 RUSC1-AS1Q66K80 236 aa10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 CACNG8Q8WXS5 425 aa10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 SARAFQ96BY9 339 aa10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 ASCL3Q9NQ33 180 aa10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 RP1L1Q8IWN7 2480 aaPredicted RBP10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 A0A1B0GXF2 115 aa10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 GLRXP35754 106 aa10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 FOXA3P55318 350 aaPredicted RBP10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 ATP5IP56385 69 aaPredicted RBP10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 ERHP84090 104 aaKnown RBP10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 FAM120AOSQ5T036 256 aa10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 LINC00322Q6ZN03 302 aaPredicted RBP10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 LINC00173Q6ZV60 143 aa10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 BLNKQ8WV28 456 aa10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 ZNF430Q9H8G1 570 aaPredicted RBP10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 LAMA5O15230 3695 aa10.84□□□□□ -0.67
SNCAIP-209ENST00000508017 IGLC7A0M8Q6 106 aa10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 TNFAIP6P98066 277 aaPredicted RBP10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 DIAPH2-AS1Q14236 149 aa10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 ZNF788Q6ZQV5 615 aa10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 ZNF833PQ6ZTB9 187 aa10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 LINC00574Q9H8X3 128 aa10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 TCRBV4S1A1TA0A5B7 111 aa10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 NKX6-3A6NJ46 265 aa10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 TOMM40O96008 361 aa10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 IGHV1-46P01743 117 aa10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 ERASQ7Z444 233 aa10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 LINC00305Q7Z4B0 112 aa10.83□□□□□ -0.68
SNCAIP-209ENST00000508017 IGLV3-9A0A075B6K5 115 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 MOSP00540 346 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 SLC25A5P05141 298 aaKnown RBP10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 HIST1H1EP10412 219 aaKnown RBP10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 CCL3L1P16619 93 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 MYCNOSP40205 109 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 GATA4P43694 442 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 UBE2V1Q13404 147 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 LEMD1Q68G75 181 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 ZNF474Q6S9Z5 364 aaPredicted RBP10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 FAM169BQ8N8A8 192 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 OR1L4Q8NGR5 311 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 OSR1Q8TAX0 266 aaPredicted RBP10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 DMXL2Q8TDJ6 3036 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 H3BTX0 84 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 APOA2P02652 100 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 SSX8Q7RTT4 187 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 MUC15Q8N387 334 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 RPRMLQ8N4K4 120 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 ZNF738Q8NE65 137 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 ZNF596Q8TC21 504 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 GTSF1Q8WW33 167 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 EPDR1Q9UM22 224 aa10.82□□□□□ -0.68
SNCAIP-209ENST00000508017 KALRNO60229 2985 aa10.81□□□□□ -0.68
SNCAIP-209ENST00000508017 LOC105371242A0A075B767 164 aa10.81□□□□□ -0.68
SNCAIP-209ENST00000508017 IGHV1-69-2A0A0G2JMI3 117 aa10.81□□□□□ -0.68
SNCAIP-209ENST00000508017 ORM2P19652 201 aa10.81□□□□□ -0.68
SNCAIP-209ENST00000508017 BPIFB3P59826 476 aa10.81□□□□□ -0.68
SNCAIP-209ENST00000508017 TMEM70Q9BUB7 260 aa10.81□□□□□ -0.68
SNCAIP-209ENST00000508017 ROS1P08922 2347 aa10.81□□□□□ -0.68
SNCAIP-209ENST00000508017 hDV102S1A0JD36 115 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 PGPA6NDG6 321 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 OR4C46A6NHA9 309 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 TM4SF5O14894 197 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 RBX1P62877 108 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 C22orf34Q6ZV56 151 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 PDPNQ86YL7 162 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 RBMXL3Q8N7X1 1067 aaKnown RBP10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 TPSG1Q9NRR2 321 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 IGHV1-24A0A0C4DH33 117 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 C22orf46C9J442 243 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 FCN3O75636 299 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 CA7P43166 264 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 HBBP68871 147 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 ATP5L2Q7Z4Y8 100 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 OR5AN1Q8NGI8 311 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 OR1B1Q8NGR6 318 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 FLYWCH2Q96CP2 140 aaKnown RBP10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 PGLYRP4Q96LB8 373 aa10.8□□□□□ -0.68
SNCAIP-209ENST00000508017 BDP1A6H8Y1 2624 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 hADV38S2A0JD32 116 aa10.79□□□□□ -0.68
SNCAIP-209ENST00000508017 ZNF137PP52743 207 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms