RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 ABHD1Q96SE0 405 aa9.54□□□□□ -0.88
DDX41-206ENST00000506965 ZNF705FA8MVS1 300 aaPredicted RBP9.53□□□□□ -0.88
DDX41-206ENST00000506965 CD74P04233 296 aa9.53□□□□□ -0.88
DDX41-206ENST00000506965 ZNF705DP0CH99 300 aaPredicted RBP9.53□□□□□ -0.88
DDX41-206ENST00000506965 ZNF705BP0CI00 300 aaPredicted RBP9.53□□□□□ -0.88
DDX41-206ENST00000506965 PGAM2P15259 253 aa9.53□□□□□ -0.88
DDX41-206ENST00000506965 RND2P52198 227 aa9.53□□□□□ -0.88
DDX41-206ENST00000506965 TMEM41BQ5BJD5 291 aa9.53□□□□□ -0.88
DDX41-206ENST00000506965 FAAP20Q6NZ36 180 aa9.53□□□□□ -0.88
DDX41-206ENST00000506965 OR13C8Q8NGS7 320 aa9.53□□□□□ -0.88
DDX41-206ENST00000506965 NAA50Q9GZZ1 169 aaKnown RBP9.53□□□□□ -0.88
DDX41-206ENST00000506965 Q9H521 79 aa9.53□□□□□ -0.88
DDX41-206ENST00000506965 TMEM231Q9H6L2 316 aa9.53□□□□□ -0.88
DDX41-206ENST00000506965 APOBP04114 4563 aaKnown RBP9.53□□□□□ -0.88
DDX41-206ENST00000506965 A0A1W2PS18 150 aa9.52□□□□□ -0.89
DDX41-206ENST00000506965 HELTA6NFD8 242 aa9.52□□□□□ -0.89
DDX41-206ENST00000506965 BUB3O43684 328 aa9.52□□□□□ -0.89
DDX41-206ENST00000506965 FXYD7P58549 80 aa9.52□□□□□ -0.89
DDX41-206ENST00000506965 MEF2DQ14814 521 aa9.52□□□□□ -0.89
DDX41-206ENST00000506965 ZNF709Q8N972 641 aa9.52□□□□□ -0.89
DDX41-206ENST00000506965 MARCH1Q8TCQ1 289 aa9.52□□□□□ -0.89
DDX41-206ENST00000506965 GLYATL2Q8WU03 294 aa9.52□□□□□ -0.89
DDX41-206ENST00000506965 TMEM230Q96A57 120 aa9.52□□□□□ -0.89
DDX41-206ENST00000506965 GPR146Q96CH1 333 aa9.52□□□□□ -0.89
DDX41-206ENST00000506965 ZNF486Q96H40 463 aaPredicted RBP9.52□□□□□ -0.89
DDX41-206ENST00000506965 RTBDNQ9BSG5 229 aaPredicted RBP9.52□□□□□ -0.89
DDX41-206ENST00000506965 FUNDC2Q9BWH2 189 aa9.52□□□□□ -0.89
DDX41-206ENST00000506965 WDR12Q9GZL7 423 aaKnown RBP9.52□□□□□ -0.89
DDX41-206ENST00000506965 IGLV2-18A0A075B6J9 118 aa9.51□□□□□ -0.89
DDX41-206ENST00000506965 CORTO00230 105 aa9.51□□□□□ -0.89
DDX41-206ENST00000506965 CDS2O95674 445 aa9.51□□□□□ -0.89
DDX41-206ENST00000506965 HNRNPCP07910 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
DDX41-206ENST00000506965 OR5AC1P0C628 307 aa9.51□□□□□ -0.89
DDX41-206ENST00000506965 S100GP29377 79 aa9.51□□□□□ -0.89
DDX41-206ENST00000506965 C2orf83Q53S99 150 aa9.51□□□□□ -0.89
DDX41-206ENST00000506965 C17orf77Q96MU5 243 aa9.51□□□□□ -0.89
DDX41-206ENST00000506965 PRR13Q9NZ81 148 aa9.51□□□□□ -0.89
DDX41-206ENST00000506965 MTFP1Q9UDX5 166 aa9.51□□□□□ -0.89
DDX41-206ENST00000506965 IGKV1D-37A0A075B6S9 117 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 SOCS3O14543 225 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 IL4P05112 153 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 HLA-DRB4P13762 266 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 OR10J1P30954 320 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 SPCS3P61009 180 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 YPEL3P61236 119 aaPredicted RBP9.5□□□□□ -0.89
DDX41-206ENST00000506965 TRIM16LQ309B1 348 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 LGALS9BQ3B8N2 356 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 RNASE10Q5GAN6 216 aaKnown RBP9.5□□□□□ -0.89
DDX41-206ENST00000506965 SELENOHQ8IZQ5 122 aaKnown RBP9.5□□□□□ -0.89
DDX41-206ENST00000506965 OR1S2Q8NGQ3 325 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 NPIPB3Q92617 1050 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 TMEM222Q9H0R3 208 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 MIXL1Q9H2W2 232 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 CACNG5Q9UF02 275 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 HLA-DRB4X5D2U9 266 aa9.5□□□□□ -0.89
DDX41-206ENST00000506965 IGKV3-20P01619 116 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 P0DMU3 169 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 FAM231AP0DMU4 169 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 FAM231CP0DMU5 169 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 SUB1P53999 127 aaKnown RBP eCLIP9.49□□□□□ -0.89
DDX41-206ENST00000506965 C1orf158Q8N1D5 194 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 ARRDC1Q8N5I2 433 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 OR52E5Q8NH55 327 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 TERB2Q8NHR7 220 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 NEU1Q99519 415 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 NDUFAF3Q9BU61 184 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 SLC35B3Q9H1N7 401 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 NRN1Q9NPD7 142 aa9.49□□□□□ -0.89
DDX41-206ENST00000506965 TRAV30A0A087WSZ9 112 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 F6UB75 175 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 TOMM40O96008 361 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 PRM2P04554 102 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 PSG1P11464 419 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 EMP1P54849 157 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 SIGLEC15Q6ZMC9 328 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 SLC24A4Q8NFF2 622 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 OR51G1Q8NGK1 321 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 PDCD10Q9BUL8 212 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 DKK2Q9UBU2 259 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 DNAH5Q8TE73 4624 aa9.48□□□□□ -0.89
DDX41-206ENST00000506965 SMIM31A0A1B0GVY4 71 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 HTR2BP41595 481 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 CTF1Q16619 201 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 NMSQ5H8A3 153 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 FAM222AQ5U5X8 452 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 TMEM229BQ8NBD8 167 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 Q8WTZ3 238 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 RRNAD1Q96FB5 475 aaKnown RBP9.47□□□□□ -0.89
DDX41-206ENST00000506965 ACY3Q96HD9 319 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 C20orf173Q96LM9 149 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 NAA60Q9H7X0 242 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 HEYLQ9NQ87 328 aaPredicted RBP9.47□□□□□ -0.89
DDX41-206ENST00000506965 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.47□□□□□ -0.89
DDX41-206ENST00000506965 COPZ2Q9P299 210 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 EXTL2Q9UBQ6 330 aa9.47□□□□□ -0.89
DDX41-206ENST00000506965 TEX13DA0A0J9YY54 714 aaPredicted RBP9.46□□□□□ -0.9
DDX41-206ENST00000506965 SLC25A4P12235 298 aa9.46□□□□□ -0.9
DDX41-206ENST00000506965 NKX2-1P43699 371 aaPredicted RBP9.46□□□□□ -0.9
DDX41-206ENST00000506965 ZNF90Q03938 601 aa9.46□□□□□ -0.9
DDX41-206ENST00000506965 ZNF79Q15937 498 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms