RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 IGLC1P0CG04 106 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 NPPCP23582 126 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 OR10J1P30954 320 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 ATP5IP56385 69 aaPredicted RBP11.58□□□□□ -0.56
MED28-204ENST00000506409 ODF3L2Q3SX64 289 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 TCF24Q7RTU0 167 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 OR1S2Q8NGQ3 325 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 ACY3Q96HD9 319 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 CITED4Q96RK1 184 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 METTL26Q96S19 204 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 GGTLC1Q9BX51 225 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 VSIRQ9H7M9 311 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 RETNQ9HD89 108 aa11.58□□□□□ -0.56
MED28-204ENST00000506409 LOC102724200A0A096LPH7 203 aaPredicted RBP11.57□□□□□ -0.56
MED28-204ENST00000506409 MED6O75586 246 aa11.57□□□□□ -0.56
MED28-204ENST00000506409 OR4E1P0C645 316 aa11.57□□□□□ -0.56
MED28-204ENST00000506409 TFPI2P48307 235 aa11.57□□□□□ -0.56
MED28-204ENST00000506409 DHRS2Q13268 280 aa11.57□□□□□ -0.56
MED28-204ENST00000506409 GGNBP1Q5YKI7 109 aa11.57□□□□□ -0.56
MED28-204ENST00000506409 FAM90A2PQ658T7 463 aa11.57□□□□□ -0.56
MED28-204ENST00000506409 COQ8AQ8NI60 647 aa11.57□□□□□ -0.56
MED28-204ENST00000506409 NPIPB3Q92617 1050 aa11.57□□□□□ -0.56
MED28-204ENST00000506409 TMEM231Q9H6L2 316 aa11.57□□□□□ -0.56
MED28-204ENST00000506409 A0A1W2PS18 150 aa11.56□□□□□ -0.56
MED28-204ENST00000506409 IAPPP10997 89 aa11.56□□□□□ -0.56
MED28-204ENST00000506409 ANXA7P20073 488 aaKnown RBP11.56□□□□□ -0.56
MED28-204ENST00000506409 YPEL3P61236 119 aaPredicted RBP11.56□□□□□ -0.56
MED28-204ENST00000506409 PAFAH1B2P68402 229 aa11.56□□□□□ -0.56
MED28-204ENST00000506409 C4orf46Q504U0 113 aa11.56□□□□□ -0.56
MED28-204ENST00000506409 NBEAL2Q6ZNJ1 2754 aa11.56□□□□□ -0.56
MED28-204ENST00000506409 LYG2Q86SG7 212 aa11.56□□□□□ -0.56
MED28-204ENST00000506409 LILRB2Q8N423 598 aa11.56□□□□□ -0.56
MED28-204ENST00000506409 GBGT1Q8N5D6 347 aa11.56□□□□□ -0.56
MED28-204ENST00000506409 MUC7Q8TAX7 377 aa11.56□□□□□ -0.56
MED28-204ENST00000506409 Q8WTZ3 238 aa11.56□□□□□ -0.56
MED28-204ENST00000506409 NARS2Q96I59 477 aaKnown RBP11.56□□□□□ -0.56
MED28-204ENST00000506409 FAM110AQ9BQ89 295 aa11.56□□□□□ -0.56
MED28-204ENST00000506409 C3orf84H3BNL1 204 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 PLA2G10O15496 165 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 LYRM1O43325 122 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 SYNGR2O43760 224 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 ADAP1O75689 374 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 DFFBO76075 338 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 CRYBB3P26998 211 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 RAB11AP62491 216 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 RPL11P62913 178 aaKnown RBP11.55□□□□□ -0.56
MED28-204ENST00000506409 CNPY1Q3B7I2 92 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 CIB3Q96Q77 187 aaPredicted RBP11.55□□□□□ -0.56
MED28-204ENST00000506409 CCDC32Q9BV29 185 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 MAGT1Q9H0U3 335 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 EDA2RQ9HAV5 297 aa11.55□□□□□ -0.56
MED28-204ENST00000506409 PAIP2BQ9ULR5 123 aaKnown RBP11.55□□□□□ -0.56
MED28-204ENST00000506409 IFNA21P01568 189 aa11.54□□□□□ -0.56
MED28-204ENST00000506409 GPX4P36969 197 aaPredicted RBP11.54□□□□□ -0.56
MED28-204ENST00000506409 CMC4P56277 68 aaPredicted RBP11.54□□□□□ -0.56
MED28-204ENST00000506409 LINC00299Q6ZSB3 139 aa11.54□□□□□ -0.56
MED28-204ENST00000506409 WFDC3Q8IUB2 231 aa11.54□□□□□ -0.56
MED28-204ENST00000506409 SLC35E1Q96K37 410 aa11.54□□□□□ -0.56
MED28-204ENST00000506409 C20orf85Q9H1P6 137 aa11.54□□□□□ -0.56
MED28-204ENST00000506409 MPTX1A8MV57 137 aa11.53□□□□□ -0.56
MED28-204ENST00000506409 DNASE2O00115 360 aaPredicted RBP11.53□□□□□ -0.56
MED28-204ENST00000506409 WRBO00258 174 aa11.53□□□□□ -0.56
MED28-204ENST00000506409 TOMM40O96008 361 aa11.53□□□□□ -0.56
MED28-204ENST00000506409 IL4P05112 153 aa11.53□□□□□ -0.56
MED28-204ENST00000506409 RD3LP0DJH9 198 aa11.53□□□□□ -0.56
MED28-204ENST00000506409 P2RY1P47900 373 aa11.53□□□□□ -0.56
MED28-204ENST00000506409 APOC4P55056 127 aa11.53□□□□□ -0.56
MED28-204ENST00000506409 RPP30P78346 268 aaKnown RBP11.53□□□□□ -0.56
MED28-204ENST00000506409 APRG1Q8IVJ8 170 aa11.53□□□□□ -0.56
MED28-204ENST00000506409 GRAMD2BQ96HH9 432 aa11.53□□□□□ -0.56
MED28-204ENST00000506409 MS4A6AQ9H2W1 248 aa11.53□□□□□ -0.56
MED28-204ENST00000506409 ZFP92A6NM28 416 aa11.52□□□□□ -0.57
MED28-204ENST00000506409 HNRNPCP07910 306 aaKnown RBP eCLIP11.52□□□□□ -0.57
MED28-204ENST00000506409 PSG1P11464 419 aa11.52□□□□□ -0.57
MED28-204ENST00000506409 GAMTQ14353 236 aa11.52□□□□□ -0.57
MED28-204ENST00000506409 USF2Q15853 346 aaPredicted RBP11.52□□□□□ -0.57
MED28-204ENST00000506409 S100ZQ8WXG8 99 aa11.52□□□□□ -0.57
MED28-204ENST00000506409 MAP6D1Q9H9H5 199 aa11.52□□□□□ -0.57
MED28-204ENST00000506409 RABAC1Q9UI14 185 aa11.52□□□□□ -0.57
MED28-204ENST00000506409 TRAV2A0A0B4J234 112 aa11.51□□□□□ -0.57
MED28-204ENST00000506409 A6NHS1 94 aa11.51□□□□□ -0.57
MED28-204ENST00000506409 TCRBP04435 133 aa11.51□□□□□ -0.57
MED28-204ENST00000506409 LYL1P12980 280 aa11.51□□□□□ -0.57
MED28-204ENST00000506409 RPL35AP18077 110 aaKnown RBP11.51□□□□□ -0.57
MED28-204ENST00000506409 NKX2-1P43699 371 aaPredicted RBP11.51□□□□□ -0.57
MED28-204ENST00000506409 ZNF124Q15973 351 aa11.51□□□□□ -0.57
MED28-204ENST00000506409 SPANXN5Q5MJ07 72 aa11.51□□□□□ -0.57
MED28-204ENST00000506409 STXBP6Q8NFX7 210 aa11.51□□□□□ -0.57
MED28-204ENST00000506409 MITD1Q8WV92 249 aa11.51□□□□□ -0.57
MED28-204ENST00000506409 U3KQE9 123 aa11.51□□□□□ -0.57
MED28-204ENST00000506409 TRAV6A0A075B6T7 132 aa11.5□□□□□ -0.57
MED28-204ENST00000506409 KIR2DL5BA0A0G2JN68 375 aa11.5□□□□□ -0.57
MED28-204ENST00000506409 KIR2DL5BA0A0G2JPC4 375 aa11.5□□□□□ -0.57
MED28-204ENST00000506409 H3BP45 60 aa11.5□□□□□ -0.57
MED28-204ENST00000506409 EIF2B2P49770 351 aaKnown RBP11.5□□□□□ -0.57
MED28-204ENST00000506409 POLR2GP62487 172 aaKnown RBP eCLIP11.5□□□□□ -0.57
MED28-204ENST00000506409 ID3Q02535 119 aa11.5□□□□□ -0.57
MED28-204ENST00000506409 CASC10Q5T4H9 136 aa11.5□□□□□ -0.57
MED28-204ENST00000506409 KIR2DL5AQ8N109 375 aa11.5□□□□□ -0.57
MED28-204ENST00000506409 OR51G1Q8NGK1 321 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms