RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 ABHD5Q8WTS1 349 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 MISP3Q96FF7 219 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 ZNF479Q96JC4 524 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 FANCD2OSQ96PS1 177 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 AQP10Q96PS8 301 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 OR4C12Q96R67 309 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 PARD6GQ9BYG4 376 aaPredicted RBP5.64□□□□□ -1.51
NUP54-204ENST00000506098 WNT10AQ9GZT5 417 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 TNFSF18Q9UNG2 199 aa5.64□□□□□ -1.51
NUP54-204ENST00000506098 STRAPQ9Y3F4 350 aaKnown RBP5.64□□□□□ -1.51
NUP54-204ENST00000506098 IGLV11-55A0A075B6I3 123 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 IGSF23A1L1A6 192 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 RNF222A6NCQ9 220 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 FAM24AA6NFZ4 105 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 CORTO00230 105 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 SOX15O60248 233 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 IGHG4P01861 327 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 REG1AP05451 166 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 APELAP0DMC3 54 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 HKR1P10072 659 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 RPL12P30050 165 aaKnown RBP5.63□□□□□ -1.51
NUP54-204ENST00000506098 RAB11AP62491 216 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 DLK1P80370 383 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 BAXQ07812 192 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 ZNF345Q14585 488 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 GUK1Q16774 197 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 ECSCRQ19T08 205 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 SPANXN5Q5MJ07 72 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 ACOT7LQ6ZUV0 252 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 RNF152Q8N8N0 203 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 OR2T6Q8NHC8 308 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 LINC01006Q8NI28 216 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 RNASEH2CQ8TDP1 164 aaKnown RBP5.63□□□□□ -1.51
NUP54-204ENST00000506098 SCARB1Q8WTV0 552 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 DCUN1D4Q92564 292 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 SMIM12Q96EX1 92 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 NUDT11Q96G61 164 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 TMEM208Q9BTX3 173 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 SLC25A31Q9H0C2 315 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 PEF1Q9UBV8 284 aaKnown RBP5.63□□□□□ -1.51
NUP54-204ENST00000506098 LINC00527Q9UJ94 153 aa5.63□□□□□ -1.51
NUP54-204ENST00000506098 SETD2Q9BYW2 2564 aaPredicted RBP5.62□□□□□ -1.51
NUP54-204ENST00000506098 FXYD6-FXYD2A0A087WZ82 144 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 A0A1B0GUS0 222 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 PSMB11A5LHX3 300 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 FNDC10F2Z333 226 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 H3BP45 60 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 I3L2K1 104 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 CYB5BO43169 146 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 ELANEP08246 267 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 OR8U8P0C7N1 319 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 PSMB8P28062 276 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 SULT1A1P50225 295 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 CAV2P51636 162 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 SNRPEP62304 92 aaKnown RBP5.62□□□□□ -1.51
NUP54-204ENST00000506098 EIF5AP63241 154 aaKnown RBP5.62□□□□□ -1.51
NUP54-204ENST00000506098 SLC35B1P78383 322 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 EWSR1Q01844 656 aaKnown RBP eCLIP5.62□□□□□ -1.51
NUP54-204ENST00000506098 ARL16Q0P5N6 197 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 OR2F1Q13607 317 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 ATP6V1FQ16864 119 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 ARSJQ5FYB0 599 aaPredicted RBP5.62□□□□□ -1.51
NUP54-204ENST00000506098 C10orf91Q5T1B1 145 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 HAPLN4Q86UW8 402 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 C1QL4Q86Z23 238 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 COMMD1Q8N668 190 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 INO80EQ8NBZ0 244 aaPredicted RBP5.62□□□□□ -1.51
NUP54-204ENST00000506098 OR4F5Q8NH21 305 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 CACNG8Q8WXS5 425 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 CSTL1Q9H114 145 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 SLC25A32Q9H2D1 315 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 TUBA4BQ9H853 241 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 THYN1Q9P016 225 aa5.62□□□□□ -1.51
NUP54-204ENST00000506098 CARHSP1Q9Y2V2 147 aaKnown RBP5.62□□□□□ -1.51
NUP54-204ENST00000506098 A0A0D9SG52 128 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 CLPSL1A2RUU4 121 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 FAM223BA6NKX1 122 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 FAM74A7A6NL05 159 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 K7EIM0 57 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 M0R143 59 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 ARPC5O15511 151 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 CST7O76096 145 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 APOC3P02656 99 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 NMBP08949 121 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 DEFA4P12838 97 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 ZNF25P17030 456 aaPredicted RBP5.61□□□□□ -1.51
NUP54-204ENST00000506098 CXCL2P19875 107 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 S100A2P29034 98 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 FCGR2BP31994 310 aaPredicted RBP5.61□□□□□ -1.51
NUP54-204ENST00000506098 RAB9AP51151 201 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 PROK1P58294 105 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 HBG1P69891 147 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 HBG2P69892 147 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 CD69Q07108 199 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 FOXE3Q13461 319 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 KIAA0141Q14154 515 aaPredicted RBP5.61□□□□□ -1.51
NUP54-204ENST00000506098 VWC2Q2TAL6 325 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 LGALSLQ3ZCW2 172 aaPredicted RBP5.61□□□□□ -1.51
NUP54-204ENST00000506098 FAM74A3Q4VXF1 159 aa5.61□□□□□ -1.51
NUP54-204ENST00000506098 LEMD1Q68G75 181 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms