RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 C6orf62Q9GZU0 229 aaPredicted RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 DCSTAMPQ9H295 470 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 PARVGQ9HBI0 331 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 OSTCQ9NRP0 149 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 MRPL27Q9P0M9 148 aaKnown RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 CYSLTR1Q9Y271 337 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 PKIGQ9Y2B9 76 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 NOSIPQ9Y314 301 aaKnown RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 NEO1Q92859 1461 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 ZNF106Q9H2Y7 1883 aaKnown RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 AHNAKQ09666 5890 aaKnown RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 A0A087X0T9 212 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 TRBV6-8A0A0A6YYG3 113 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 INE1O15225 51 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 LYZL6O75951 148 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR2J2O76002 312 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 C8GP07360 202 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR4E1P0C645 316 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 PPIBP23284 216 aaKnown RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 RPS20P60866 119 aaKnown RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 RHOBP62745 196 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 HIST1H3AP68431 136 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 H3F3AP84243 136 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 EDDM3AQ14507 147 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 TSNQ15631 228 aaKnown RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 MPV17LQ2QL34 196 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 IAH1Q2TAA2 248 aaPredicted RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 LINC01554Q52M75 96 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 RNASE10Q5GAN6 216 aaKnown RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 C1orf137Q5JT78 98 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 BRMS1LQ5PSV4 323 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OTUD6BQ8N6M0 293 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 LINC00301Q8NCQ3 95 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR13D1Q8NGV5 346 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR2T10Q8NGZ9 312 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 FAM172AQ8WUF8 416 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OBSCN-AS1Q96MR7 158 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 HIST1H2BLQ99880 126 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 C14orf132Q9NPU4 83 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 ZFP30Q9Y2G7 519 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 MYO3BQ8WXR4 1341 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 ADCY9O60503 1353 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 PLXNA4Q9HCM2 1894 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 hCG_1818297A0A087WSY0 165 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 hADV38S2A0JD32 116 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 CCDC160A6NGH7 325 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 A8MT66 165 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 ZNF736B4DX44 427 aaPredicted RBP0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 KPNA3O00505 521 aaPredicted RBP0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 CYB5BO43169 146 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 PDE6DO43924 150 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 CNIH1O95406 144 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 RPS17P08708 135 aaKnown RBP0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 SPA17Q15506 151 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 ESRGQ1W209 222 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 RGS21Q2M5E4 152 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 TMEM97Q5BJF2 176 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 FAM74A1Q5RGS3 127 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 LYRM7Q5U5X0 104 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 TEX261Q6UWH6 196 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 SOSTDC1Q6X4U4 206 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 C3orf56Q8N813 242 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 TMEM254Q8TBM7 123 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 BORCS5Q969J3 196 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 PPP1R14BQ96C90 147 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 BTF3L4Q96K17 158 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 AMELYQ99218 206 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 LINC00467Q9BRT7 94 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR51V1Q9H2C8 321 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 RNF122Q9H9V4 155 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 TVP23BQ9NYZ1 205 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 U3KQ87 197 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 V9GYY5 206 aaPredicted RBP0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 ADGRB2O60241 1585 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 MED1Q15648 1581 aaPredicted RBP0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 ROBO3Q96MS0 1386 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 KDM6AO15550 1401 aaPredicted RBP0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 PIK3C2GO75747 1445 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 TNS3Q68CZ2 1445 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 CASP8AP2Q9UKL3 1982 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 PLB1Q6P1J6 1458 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 MUC5BQ9HC84 5762 aaPredicted RBP0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 TAF1LQ8IZX4 1826 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 TRGV10A0A0A0MS01 117 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 FAM236DA0A1B0GTK5 79 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 C1orf196B1AJZ1 125 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 ZNF682O95780 498 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 SERPINE1P05121 402 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 FAM236CP0DP71 79 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 SRP14P37108 136 aaKnown RBP0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 DEFA1P59665 94 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 EIF5AP63241 154 aaKnown RBP0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 AESQ08117 197 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 SRSF6Q13247 344 aaKnown RBP0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 C12orf74Q32Q52 190 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 KRTAP21-1Q3LI58 79 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 Q6Q795 121 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 C2orf82Q6UX34 121 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 LCA10Q71F78 164 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 KRTAP19-3Q7Z4W3 81 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms