RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 C6orf62Q9GZU0 229 aaPredicted RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 DCSTAMPQ9H295 470 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 PARVGQ9HBI0 331 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 OSTCQ9NRP0 149 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 MRPL27Q9P0M9 148 aaKnown RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 CYSLTR1Q9Y271 337 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 PKIGQ9Y2B9 76 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 NOSIPQ9Y314 301 aaKnown RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 NEO1Q92859 1461 aa0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 ZNF106Q9H2Y7 1883 aaKnown RBP0.33□□□□□ -2.36
HMGB1P29-201ENST00000505659 AHNAKQ09666 5890 aaKnown RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 A0A087X0T9 212 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 TRBV6-8A0A0A6YYG3 113 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 INE1O15225 51 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 LYZL6O75951 148 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR2J2O76002 312 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 C8GP07360 202 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR4E1P0C645 316 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 PPIBP23284 216 aaKnown RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 RPS20P60866 119 aaKnown RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 RHOBP62745 196 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 HIST1H3AP68431 136 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 H3F3AP84243 136 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 EDDM3AQ14507 147 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 TSNQ15631 228 aaKnown RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 MPV17LQ2QL34 196 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 IAH1Q2TAA2 248 aaPredicted RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 LINC01554Q52M75 96 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 RNASE10Q5GAN6 216 aaKnown RBP0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 C1orf137Q5JT78 98 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 BRMS1LQ5PSV4 323 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OTUD6BQ8N6M0 293 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 LINC00301Q8NCQ3 95 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR13D1Q8NGV5 346 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR2T10Q8NGZ9 312 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 FAM172AQ8WUF8 416 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 OBSCN-AS1Q96MR7 158 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 HIST1H2BLQ99880 126 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 C14orf132Q9NPU4 83 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 ZFP30Q9Y2G7 519 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 MYO3BQ8WXR4 1341 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 ADCY9O60503 1353 aa0.32□□□□□ -2.36
HMGB1P29-201ENST00000505659 PLXNA4Q9HCM2 1894 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 hCG_1818297A0A087WSY0 165 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 hADV38S2A0JD32 116 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 CCDC160A6NGH7 325 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 A8MT66 165 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 ZNF736B4DX44 427 aaPredicted RBP0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 KPNA3O00505 521 aaPredicted RBP0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 CYB5BO43169 146 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 PDE6DO43924 150 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 CNIH1O95406 144 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 RPS17P08708 135 aaKnown RBP0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 SPA17Q15506 151 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 ESRGQ1W209 222 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 RGS21Q2M5E4 152 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 TMEM97Q5BJF2 176 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 FAM74A1Q5RGS3 127 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 LYRM7Q5U5X0 104 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 TEX261Q6UWH6 196 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 SOSTDC1Q6X4U4 206 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 C3orf56Q8N813 242 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 TMEM254Q8TBM7 123 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 BORCS5Q969J3 196 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 PPP1R14BQ96C90 147 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 BTF3L4Q96K17 158 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 AMELYQ99218 206 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 LINC00467Q9BRT7 94 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 OR51V1Q9H2C8 321 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 RNF122Q9H9V4 155 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 TVP23BQ9NYZ1 205 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 U3KQ87 197 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 V9GYY5 206 aaPredicted RBP0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 ADGRB2O60241 1585 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 MED1Q15648 1581 aaPredicted RBP0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 ROBO3Q96MS0 1386 aa0.31□□□□□ -2.36
HMGB1P29-201ENST00000505659 KDM6AO15550 1401 aaPredicted RBP0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 PIK3C2GO75747 1445 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 TNS3Q68CZ2 1445 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 CASP8AP2Q9UKL3 1982 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 PLB1Q6P1J6 1458 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 MUC5BQ9HC84 5762 aaPredicted RBP0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 TAF1LQ8IZX4 1826 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 TRGV10A0A0A0MS01 117 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 FAM236DA0A1B0GTK5 79 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 C1orf196B1AJZ1 125 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 ZNF682O95780 498 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 SERPINE1P05121 402 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 FAM236CP0DP71 79 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 SRP14P37108 136 aaKnown RBP0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 DEFA1P59665 94 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 EIF5AP63241 154 aaKnown RBP0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 AESQ08117 197 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 SRSF6Q13247 344 aaKnown RBP0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 C12orf74Q32Q52 190 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 KRTAP21-1Q3LI58 79 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 Q6Q795 121 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 C2orf82Q6UX34 121 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 LCA10Q71F78 164 aa0.3□□□□□ -2.36
HMGB1P29-201ENST00000505659 KRTAP19-3Q7Z4W3 81 aa0.3□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms