RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 DNAH17Q9UFH2 4485 aa7.2□□□□□ -1.26
NEDD9-210ENST00000505589 IGHV4-28A0A0C4DH34 117 aa7.19□□□□□ -1.26
NEDD9-210ENST00000505589 ZNF207O43670 478 aaKnown RBP7.19□□□□□ -1.26
NEDD9-210ENST00000505589 PPYP01298 95 aa7.19□□□□□ -1.26
NEDD9-210ENST00000505589 AP2S1P53680 142 aaPredicted RBP7.19□□□□□ -1.26
NEDD9-210ENST00000505589 TSPAN5P62079 268 aa7.19□□□□□ -1.26
NEDD9-210ENST00000505589 ERHP84090 104 aaKnown RBP7.19□□□□□ -1.26
NEDD9-210ENST00000505589 ZNF124Q15973 351 aa7.19□□□□□ -1.26
NEDD9-210ENST00000505589 Q6ZTC4 211 aa7.19□□□□□ -1.26
NEDD9-210ENST00000505589 GRAMD2BQ96HH9 432 aa7.19□□□□□ -1.26
NEDD9-210ENST00000505589 SLC5A7Q9GZV3 580 aa7.19□□□□□ -1.26
NEDD9-210ENST00000505589 MS4A6AQ9H2W1 248 aa7.19□□□□□ -1.26
NEDD9-210ENST00000505589 OR51B2Q9Y5P1 312 aa7.19□□□□□ -1.26
NEDD9-210ENST00000505589 DNAH11Q96DT5 4516 aa7.19□□□□□ -1.26
NEDD9-210ENST00000505589 DYNC1H1Q14204 4646 aaKnown RBP7.18□□□□□ -1.26
NEDD9-210ENST00000505589 TEX48A0A1B0GUV7 120 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 C7orf66A4D0T2 115 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 TMEM189A5PLL7 270 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 MARCH11A6NNE9 402 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 K7EIM0 57 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 M0R2N4 97 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 PRAF2O60831 178 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 RLN1P04808 185 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 NPPCP23582 126 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 F2RP25116 425 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 S100GP29377 79 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 BCAP31P51572 246 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 WT1-ASQ06250 92 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 SURF2Q15527 256 aaPredicted RBP7.18□□□□□ -1.26
NEDD9-210ENST00000505589 RNF212Q495C1 297 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 AADACL3Q5VUY0 350 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 UBE2DNLQ8IWF7 75 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 CMTM1Q8IZ96 169 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 OR6F1Q8NGZ6 308 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 TERB2Q8NHR7 220 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 FXYD6Q9H0Q3 95 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 VSIRQ9H7M9 311 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 FLVCR2Q9UPI3 526 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 ALG5Q9Y673 324 aa7.18□□□□□ -1.26
NEDD9-210ENST00000505589 IGHV3OR16-8A0A075B7F1 116 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 IGHV3-21A0A0B4J1V1 117 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 TRAV3A0A0B4J244 114 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 RTL8CO15255 209 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 RBMY1A1P0DJD3 496 aaKnown RBP7.17□□□□□ -1.26
NEDD9-210ENST00000505589 RBMY1CP0DJD4 496 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 ANXA7P20073 488 aaKnown RBP7.17□□□□□ -1.26
NEDD9-210ENST00000505589 HOXA1P49639 335 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-210ENST00000505589 HERV-K104P61576 105 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 RBMY1FQ15415 496 aaKnown RBP7.17□□□□□ -1.26
NEDD9-210ENST00000505589 LEMD1Q68G75 181 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 DHRS11Q6UWP2 260 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 ZNF600Q6ZNG1 722 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 TMED4Q7Z7H5 227 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 MARCH1Q8TCQ1 289 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 MOB3AQ96BX8 217 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 SCGB3A2Q96PL1 93 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 ZNF2Q9BSG1 426 aaPredicted RBP7.17□□□□□ -1.26
NEDD9-210ENST00000505589 RABAC1Q9UI14 185 aa7.17□□□□□ -1.26
NEDD9-210ENST00000505589 SMIM9A6NGZ8 99 aa7.16□□□□□ -1.26
NEDD9-210ENST00000505589 F8W735 103 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-210ENST00000505589 CDK2AP2O75956 126 aa7.16□□□□□ -1.26
NEDD9-210ENST00000505589 KRASP01116 189 aa7.16□□□□□ -1.26
NEDD9-210ENST00000505589 IL5P05113 134 aa7.16□□□□□ -1.26
NEDD9-210ENST00000505589 SPART-AS1P0CW21 52 aa7.16□□□□□ -1.26
NEDD9-210ENST00000505589 SUB1P53999 127 aaKnown RBP eCLIP7.16□□□□□ -1.26
NEDD9-210ENST00000505589 FAM3BP58499 235 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-210ENST00000505589 UBE2MP61081 183 aaKnown RBP7.16□□□□□ -1.26
NEDD9-210ENST00000505589 C1orf134Q5TEV5 83 aa7.16□□□□□ -1.26
NEDD9-210ENST00000505589 TRPT1Q86TN4 253 aaKnown RBP7.16□□□□□ -1.26
NEDD9-210ENST00000505589 OR51H1Q8NH63 302 aa7.16□□□□□ -1.26
NEDD9-210ENST00000505589 CHAC2Q8WUX2 184 aa7.16□□□□□ -1.26
NEDD9-210ENST00000505589 MISP3Q96FF7 219 aa7.16□□□□□ -1.26
NEDD9-210ENST00000505589 ZNF414Q96IQ9 312 aa7.16□□□□□ -1.26
NEDD9-210ENST00000505589 METTL26Q96S19 204 aa7.16□□□□□ -1.26
NEDD9-210ENST00000505589 FAM212BQ9NTI7 297 aaPredicted RBP7.16□□□□□ -1.26
NEDD9-210ENST00000505589 PKD1P98161 4303 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 IGHV3-49A0A0A0MS15 119 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 HELTA6NFD8 242 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 SNRPGP15A8MWD9 76 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 I3L2K1 104 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 CORTO00230 105 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 MT-CO2P00403 227 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 PGAM2P15259 253 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 SNCAP37840 140 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 LPAR6P43657 344 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 UCP3P55916 312 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 FXYD4P59646 89 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 C12orf74Q32Q52 190 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 LPCAT3Q6P1A2 487 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 TOMM20LQ6UXN7 152 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 ZNF818PQ6ZRF7 136 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 ZNF114Q8NC26 417 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 OR4A16Q8NH70 328 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 ST8SIA2Q92186 375 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 GPHA2Q96T91 129 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 GPN1Q9HCN4 374 aaPredicted RBP7.15□□□□□ -1.26
NEDD9-210ENST00000505589 SEPSECSQ9HD40 501 aaKnown RBP7.15□□□□□ -1.26
NEDD9-210ENST00000505589 GPR132Q9UNW8 380 aa7.15□□□□□ -1.26
NEDD9-210ENST00000505589 C14orf166Q9Y224 244 aaKnown RBP7.15□□□□□ -1.26
NEDD9-210ENST00000505589 IGHV3OR16-13A0A075B7E8 117 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms