RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 IGLC1P0CG04 106 aa12.74□□□□□ -0.37
SYNE4-207ENST00000505054 CBLN1P23435 193 aa12.74□□□□□ -0.37
SYNE4-207ENST00000505054 ELLP55199 621 aaPredicted RBP12.74□□□□□ -0.37
SYNE4-207ENST00000505054 RAB11AP62491 216 aa12.74□□□□□ -0.37
SYNE4-207ENST00000505054 RPP30P78346 268 aaKnown RBP12.74□□□□□ -0.37
SYNE4-207ENST00000505054 ACY3Q96HD9 319 aa12.74□□□□□ -0.37
SYNE4-207ENST00000505054 SMIM8Q96KF7 97 aa12.74□□□□□ -0.37
SYNE4-207ENST00000505054 RAB40CQ96S21 281 aa12.74□□□□□ -0.37
SYNE4-207ENST00000505054 PSENENQ9NZ42 101 aa12.74□□□□□ -0.37
SYNE4-207ENST00000505054 ZNF256Q9Y2P7 627 aaPredicted RBP12.74□□□□□ -0.37
SYNE4-207ENST00000505054 STRAPQ9Y3F4 350 aaKnown RBP12.74□□□□□ -0.37
SYNE4-207ENST00000505054 DYNC2H1Q8NCM8 4307 aaKnown RBP12.74□□□□□ -0.37
SYNE4-207ENST00000505054 K7EPK0 472 aa12.73□□□□□ -0.37
SYNE4-207ENST00000505054 C8orf88P0DMB2 117 aa12.73□□□□□ -0.37
SYNE4-207ENST00000505054 GPX4P36969 197 aaPredicted RBP12.73□□□□□ -0.37
SYNE4-207ENST00000505054 TIGITQ495A1 244 aa12.73□□□□□ -0.37
SYNE4-207ENST00000505054 ZNF600Q6ZNG1 722 aa12.73□□□□□ -0.37
SYNE4-207ENST00000505054 NPIPB3Q92617 1050 aa12.73□□□□□ -0.37
SYNE4-207ENST00000505054 ASCL2Q99929 193 aa12.73□□□□□ -0.37
SYNE4-207ENST00000505054 C20orf24Q9BUV8 137 aa12.73□□□□□ -0.37
SYNE4-207ENST00000505054 C11orf1Q9H5F2 150 aa12.73□□□□□ -0.37
SYNE4-207ENST00000505054 ZFAND3Q9H8U3 227 aa12.73□□□□□ -0.37
SYNE4-207ENST00000505054 DAZ1Q9NQZ3 744 aaKnown RBP12.73□□□□□ -0.37
SYNE4-207ENST00000505054 IZUMO1RA6ND01 250 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 ZNF207O43670 478 aaKnown RBP12.72□□□□□ -0.37
SYNE4-207ENST00000505054 YIF1AO95070 293 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 OR10J1P30954 320 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 TAS2R30P59541 319 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 GAMTQ14353 236 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 TOMM20LQ6UXN7 152 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 TMEM14EPQ6UXP3 125 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 OR1S2Q8NGQ3 325 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 MUC7Q8TAX7 377 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 DYNLRB2Q8TF09 96 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 MARC2Q969Z3 335 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 MLXQ9UH92 298 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 LSM5Q9Y4Y9 91 aaKnown RBP12.72□□□□□ -0.37
SYNE4-207ENST00000505054 PUS1Q9Y606 427 aaKnown RBP eCLIP12.72□□□□□ -0.37
SYNE4-207ENST00000505054 ALG5Q9Y673 324 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 SELENOKQ9Y6D0 94 aa12.72□□□□□ -0.37
SYNE4-207ENST00000505054 TRAV30A0A087WSZ9 112 aa12.71□□□□□ -0.37
SYNE4-207ENST00000505054 PMS2P5A8MQ11 134 aa12.71□□□□□ -0.37
SYNE4-207ENST00000505054 K7EMT4 169 aa12.71□□□□□ -0.37
SYNE4-207ENST00000505054 SSNA1O43805 119 aa12.71□□□□□ -0.37
SYNE4-207ENST00000505054 TSC22D2O75157 780 aa12.71□□□□□ -0.37
SYNE4-207ENST00000505054 CCNKO75909 580 aa12.71□□□□□ -0.37
SYNE4-207ENST00000505054 RAB32Q13637 225 aa12.71□□□□□ -0.37
SYNE4-207ENST00000505054 RGS21Q2M5E4 152 aa12.71□□□□□ -0.37
SYNE4-207ENST00000505054 DEFB114Q30KQ6 69 aa12.71□□□□□ -0.37
SYNE4-207ENST00000505054 CD300EQ496F6 205 aaPredicted RBP12.71□□□□□ -0.37
SYNE4-207ENST00000505054 CASC10Q5T4H9 136 aa12.71□□□□□ -0.37
SYNE4-207ENST00000505054 SLC35E1Q96K37 410 aa12.71□□□□□ -0.37
SYNE4-207ENST00000505054 MRPL27Q9P0M9 148 aaKnown RBP12.71□□□□□ -0.37
SYNE4-207ENST00000505054 HUWE1Q7Z6Z7 4374 aaKnown RBP12.7□□□□□ -0.38
SYNE4-207ENST00000505054 SCGB2A1O75556 95 aa12.7□□□□□ -0.38
SYNE4-207ENST00000505054 H2BFSP57053 126 aa12.7□□□□□ -0.38
SYNE4-207ENST00000505054 S100A10P60903 97 aa12.7□□□□□ -0.38
SYNE4-207ENST00000505054 BTNL8Q6UX41 500 aa12.7□□□□□ -0.38
SYNE4-207ENST00000505054 ACOT7LQ6ZUV0 252 aa12.7□□□□□ -0.38
SYNE4-207ENST00000505054 OR2K2Q8NGT1 345 aa12.7□□□□□ -0.38
SYNE4-207ENST00000505054 WDR89Q96FK6 387 aaPredicted RBP12.7□□□□□ -0.38
SYNE4-207ENST00000505054 TECRQ9NZ01 308 aaKnown RBP12.7□□□□□ -0.38
SYNE4-207ENST00000505054 SORL1Q92673 2214 aa12.69□□□□□ -0.38
SYNE4-207ENST00000505054 IGKV1D-37A0A075B6S9 117 aa12.69□□□□□ -0.38
SYNE4-207ENST00000505054 SCAF4O95104 1147 aaKnown RBP12.69□□□□□ -0.38
SYNE4-207ENST00000505054 METTL15P1P0C7V9 234 aa12.69□□□□□ -0.38
SYNE4-207ENST00000505054 GP9P14770 177 aa12.69□□□□□ -0.38
SYNE4-207ENST00000505054 YPEL3P61236 119 aaPredicted RBP12.69□□□□□ -0.38
SYNE4-207ENST00000505054 OR8G2PQ6IF36 304 aa12.69□□□□□ -0.38
SYNE4-207ENST00000505054 LCN12Q6JVE5 192 aa12.69□□□□□ -0.38
SYNE4-207ENST00000505054 SMAD5-AS1Q9Y6J3 95 aa12.69□□□□□ -0.38
SYNE4-207ENST00000505054 IGKV1OR2-108A0A075B7D4 117 aa12.68□□□□□ -0.38
SYNE4-207ENST00000505054 IGHV7-4-1A0A0J9YVY3 117 aa12.68□□□□□ -0.38
SYNE4-207ENST00000505054 L7N2F9 121 aa12.68□□□□□ -0.38
SYNE4-207ENST00000505054 VAMP2P63027 116 aa12.68□□□□□ -0.38
SYNE4-207ENST00000505054 ARL16Q0P5N6 197 aa12.68□□□□□ -0.38
SYNE4-207ENST00000505054 OXA1LQ15070 435 aa12.68□□□□□ -0.38
SYNE4-207ENST00000505054 TMEM61Q8N0U2 210 aa12.68□□□□□ -0.38
SYNE4-207ENST00000505054 GINS3Q9BRX5 216 aa12.68□□□□□ -0.38
SYNE4-207ENST00000505054 NMES1Q9C002 83 aa12.68□□□□□ -0.38
SYNE4-207ENST00000505054 MGAT4CQ9UBM8 478 aa12.68□□□□□ -0.38
SYNE4-207ENST00000505054 SMPXQ9UHP9 88 aa12.68□□□□□ -0.38
SYNE4-207ENST00000505054 IGHV3-49A0A0A0MS15 119 aa12.67□□□□□ -0.38
SYNE4-207ENST00000505054 TOMM40O96008 361 aa12.67□□□□□ -0.38
SYNE4-207ENST00000505054 THAP8Q8NA92 274 aa12.67□□□□□ -0.38
SYNE4-207ENST00000505054 RCHY1Q96PM5 261 aa12.67□□□□□ -0.38
SYNE4-207ENST00000505054 TENM2Q9NT68 2774 aa12.67□□□□□ -0.38
SYNE4-207ENST00000505054 IGHV3OR16-13A0A075B7E8 117 aa12.66□□□□□ -0.38
SYNE4-207ENST00000505054 TRAV14DV4A0A0A6YYC5 116 aa12.66□□□□□ -0.38
SYNE4-207ENST00000505054 IGHV3-74A0A0B4J1X5 117 aa12.66□□□□□ -0.38
SYNE4-207ENST00000505054 ZFP92A6NM28 416 aa12.66□□□□□ -0.38
SYNE4-207ENST00000505054 ZNF785A8K8V0 405 aa12.66□□□□□ -0.38
SYNE4-207ENST00000505054 DEDDO75618 318 aa12.66□□□□□ -0.38
SYNE4-207ENST00000505054 APOHP02749 345 aaPredicted RBP12.66□□□□□ -0.38
SYNE4-207ENST00000505054 PSG1P11464 419 aa12.66□□□□□ -0.38
SYNE4-207ENST00000505054 CAV2P51636 162 aa12.66□□□□□ -0.38
SYNE4-207ENST00000505054 ZNF90Q03938 601 aa12.66□□□□□ -0.38
SYNE4-207ENST00000505054 Q8WTZ3 238 aa12.66□□□□□ -0.38
SYNE4-207ENST00000505054 RHPN1-AS1Q9BWJ2 59 aa12.66□□□□□ -0.38
SYNE4-207ENST00000505054 SACSQ9NZJ4 4579 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms