RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 GATA2P23769 480 aaPredicted RBP8.08□□□□□ -1.12
TPM3-217ENST00000504663 OR10J1P30954 320 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 RPL29P47914 159 aaKnown RBP8.08□□□□□ -1.12
TPM3-217ENST00000504663 CAMLGP49069 296 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 HILS1P60008 231 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 ZNF90Q03938 601 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 KIAA0141Q14154 515 aaPredicted RBP8.08□□□□□ -1.12
TPM3-217ENST00000504663 SPSB3Q6PJ21 355 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 RPP25LQ8N5L8 163 aaKnown RBP8.08□□□□□ -1.12
TPM3-217ENST00000504663 STPG3Q8N7X2 389 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 ZNF502Q8TBZ5 544 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 SCGB1C1Q8TD33 95 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 MYOZ3Q8TDC0 251 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 RNF141Q8WVD5 230 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 CDC42EP3Q9UKI2 254 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 PXMP4Q9Y6I8 212 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 S4R3C0 116 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 TCRBV4S1A1TA0A5B7 111 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 BTBD17A6NE02 478 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 SEC14L6B5MCN3 397 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 H3BUA1 57 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 CLN5O75503 358 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 EIF3GO75821 320 aaKnown RBP eCLIP8.07□□□□□ -1.12
TPM3-217ENST00000504663 RNASE1P07998 156 aaKnown RBP8.07□□□□□ -1.12
TPM3-217ENST00000504663 HIST1H1BP16401 226 aaKnown RBP8.07□□□□□ -1.12
TPM3-217ENST00000504663 SRD5A1P18405 259 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 ADMP35318 185 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 ELLP55199 621 aaPredicted RBP8.07□□□□□ -1.12
TPM3-217ENST00000504663 RHOGP84095 191 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 SERF2P84101 59 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 ETFRF1Q6IPR1 90 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 Q6ZRG5 221 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 CYP2G1PQ6ZSU1 146 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 Q6ZSV7 163 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 VN1R17PQ8TDU5 208 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 SAT2Q96F10 170 aaPredicted RBP8.07□□□□□ -1.12
TPM3-217ENST00000504663 TRGV9Q99603 122 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 SCRT1Q9BWW7 348 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 NPFFR1Q9GZQ6 430 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 KLK15Q9H2R5 256 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 MED9Q9NWA0 146 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 NF1P21359 2839 aa8.07□□□□□ -1.12
TPM3-217ENST00000504663 FAM181BA6NEQ2 426 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 UMAD1C9J7I0 102 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 TRIM77I1YAP6 450 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 TSPAN9O75954 239 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 IGHV3-23P01764 117 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 IGHG4P01861 327 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 PSMB8P28062 276 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 RAB5CP51148 216 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 TIGITQ495A1 244 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 TMEM41BQ5BJD5 291 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 FFAR4Q5NUL3 377 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 PXDC1Q5TGL8 231 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 EIF5AL1Q6IS14 154 aaKnown RBP8.06□□□□□ -1.12
TPM3-217ENST00000504663 PATE2Q6UY27 113 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 LCNL1Q6ZST4 164 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 RNF152Q8N8N0 203 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 PRSS22Q9GZN4 317 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 SLC39A9Q9NUM3 307 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 FBXL7Q9UJT9 491 aa8.06□□□□□ -1.12
TPM3-217ENST00000504663 ZNF705EA8MWA4 302 aaPredicted RBP8.05□□□□□ -1.12
TPM3-217ENST00000504663 C17orf112F2Z3M2 114 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 TEX46H3BTG2 121 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 TSPAN15O95858 294 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 PLP1P60201 277 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 B2MP61769 119 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 C15orf32Q32M92 178 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 SPATA31B1PQ5VZV4 182 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 DPPA3Q6W0C5 159 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 SLC7A5P1Q8MH63 180 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 NECAP1Q8NC96 275 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 BPIFCQ8NFQ6 507 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 FAM213BQ8TBF2 198 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 LRRC20Q8TCA0 184 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 MBD3L1Q8WWY6 194 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 TMEM37Q8WXS4 190 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 MS4A10Q96PG2 267 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 CHRDL1Q9BU40 450 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 C21orf62Q9NYP8 219 aa8.05□□□□□ -1.12
TPM3-217ENST00000504663 TMEM89A2RUT3 159 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 FAM223BA6NKX1 122 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 CRLF1O75462 422 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 CTSGP08311 255 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 OR5G3P0C626 314 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 M6PRP20645 277 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 MFAP4P55083 255 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 CCL20P78556 96 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 AKR1C8PQ5T2L2 129 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 MORN5Q5VZ52 161 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 FAM223AQ8IWN6 122 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 SLC25A22Q9H936 323 aa8.04□□□□□ -1.12
TPM3-217ENST00000504663 TRAV1-1A0A0B4J248 108 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 WI2-2373I1.2A0A1W2PRP0 233 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 ZFP92A6NM28 416 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 TOMM40O96008 361 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 TRBV12-3P01733 135 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 TRGV3P03979 118 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 PSG1P11464 419 aa8.03□□□□□ -1.12
TPM3-217ENST00000504663 RPL15P61313 204 aaKnown RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms