RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 SMPXQ9UHP9 88 aa10.38□□□□□ -0.75
PDLIM7-211ENST00000504318 PLECQ15149 4684 aaKnown RBP10.37□□□□□ -0.75
PDLIM7-211ENST00000504318 IGHV7-4-1A0A0J9YVY3 117 aa10.37□□□□□ -0.75
PDLIM7-211ENST00000504318 LCE6AA0A183 80 aa10.37□□□□□ -0.75
PDLIM7-211ENST00000504318 B3GALNT1O75752 331 aa10.37□□□□□ -0.75
PDLIM7-211ENST00000504318 OR5AC1P0C628 307 aa10.37□□□□□ -0.75
PDLIM7-211ENST00000504318 CYCSP99999 105 aaKnown RBP10.37□□□□□ -0.75
PDLIM7-211ENST00000504318 GSG1LQ6UXU4 331 aa10.37□□□□□ -0.75
PDLIM7-211ENST00000504318 GALNT14Q96FL9 552 aa10.37□□□□□ -0.75
PDLIM7-211ENST00000504318 PDCD10Q9BUL8 212 aa10.37□□□□□ -0.75
PDLIM7-211ENST00000504318 GGTLC1Q9BX51 225 aa10.37□□□□□ -0.75
PDLIM7-211ENST00000504318 ALMS1Q8TCU4 4167 aa10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 AKR1C2P52895 323 aa10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 NKX2-5P52952 324 aaPredicted RBP10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 H2BFSP57053 126 aa10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 SUPT4H1P63272 117 aaKnown RBP10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 ERHP84090 104 aaKnown RBP10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 RELQ04864 619 aaPredicted RBP10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 ANKRD55Q3KP44 614 aa10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 RBPMS2Q6ZRY4 209 aaKnown RBP10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 SELENOHQ8IZQ5 122 aaKnown RBP10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 LILRB2Q8N423 598 aa10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 TMEM170AQ8WVE7 144 aa10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 C20orf24Q9BUV8 137 aa10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 UBQLN2Q9UHD9 624 aa10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 TMEM56-RWDD3S4R434 201 aa10.36□□□□□ -0.75
PDLIM7-211ENST00000504318 LOC102724200A0A096LPH7 203 aaPredicted RBP10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 A0A1B0GU03 582 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 SMLR1H3BR10 107 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 NUPL2O15504 423 aaKnown RBP10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 TMEM50AO95807 157 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 IFNA21P01568 189 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 APOHP02749 345 aaPredicted RBP10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 MLANAQ16655 118 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 TOMM20LQ6UXN7 152 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 WFDC3Q8IUB2 231 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 FAM219AQ8IW50 185 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 LGI3Q8N145 548 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 OR52E5Q8NH55 327 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 GPR146Q96CH1 333 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 RHPN1-AS1Q9BWJ2 59 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 VSIRQ9H7M9 311 aa10.35□□□□□ -0.75
PDLIM7-211ENST00000504318 C5orf51A6NDU8 294 aa10.34□□□□□ -0.75
PDLIM7-211ENST00000504318 FAM25EA8MYX2 175 aa10.34□□□□□ -0.75
PDLIM7-211ENST00000504318 TMEM187Q14656 261 aa10.34□□□□□ -0.75
PDLIM7-211ENST00000504318 SLC35G3Q8N808 338 aa10.34□□□□□ -0.75
PDLIM7-211ENST00000504318 LRTM2Q8N967 370 aa10.34□□□□□ -0.75
PDLIM7-211ENST00000504318 TMEM116Q8NCL8 245 aa10.34□□□□□ -0.75
PDLIM7-211ENST00000504318 RBPMSQ93062 196 aaKnown RBP10.34□□□□□ -0.75
PDLIM7-211ENST00000504318 PINX1Q96BK5 328 aaKnown RBP10.34□□□□□ -0.75
PDLIM7-211ENST00000504318 NMES1Q9C002 83 aa10.34□□□□□ -0.75
PDLIM7-211ENST00000504318 IGHV3-49A0A0A0MS15 119 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 DUXBA0A1W2PPF3 345 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 HMSDA8MTL9 139 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 ATG12O94817 140 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 SIX6O95475 246 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 IGKV1-17P01599 117 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 PET100P0DJ07 73 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 SPCS3P61009 180 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 EWSR1Q01844 656 aaKnown RBP eCLIP10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 ZNF124Q15973 351 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 C9orf62Q8N4C0 152 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 ZBTB8BQ8NAP8 495 aaPredicted RBP10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 OR4X1Q8NH49 305 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 ST8SIA2Q92186 375 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 PRR13Q9NZ81 148 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 HSPB11Q9Y547 144 aa10.33□□□□□ -0.76
PDLIM7-211ENST00000504318 IGHV3OR16-13A0A075B7E8 117 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 TRAV14DV4A0A0A6YYC5 116 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 IGHV3-74A0A0B4J1X5 117 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 G3V3Q6 166 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 GNG7O60262 68 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 CLN5O75503 358 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 IFNA17P01571 189 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 NMSQ5H8A3 153 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 LAMTOR1Q6IAA8 161 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 ZNF600Q6ZNG1 722 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 Q6ZWC4 215 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 IL22RA2Q969J5 263 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 RRNAD1Q96FB5 475 aaKnown RBP10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 C2orf50Q96LR7 162 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 CACNG5Q9UF02 275 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 TP53TG1Q9Y2A0 90 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 TMED3Q9Y3Q3 217 aa10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 PUS1Q9Y606 427 aaKnown RBP eCLIP10.32□□□□□ -0.76
PDLIM7-211ENST00000504318 KIR2DL5BA0A0G2JN68 375 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 KIR2DL5BA0A0G2JPC4 375 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 OR4C46A6NHA9 309 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 CORTO00230 105 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 CCSO14618 274 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 NXPH3O95157 252 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 NPBWR1P48145 328 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 HOXA1P49639 335 aaPredicted RBP10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 C2orf83Q53S99 150 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 TMEM268Q5VZI3 342 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 KIR2DL5AQ8N109 375 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 KIR2DL5BQ8NHK3 375 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 THAP6Q8TBB0 222 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 MAP6D1Q9H9H5 199 aa10.31□□□□□ -0.76
PDLIM7-211ENST00000504318 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms